TABLE 2.
Nucleotide sequences of primers used for amplification and sequencing of the ankA gene
Primer | Nucleotide sequence |
---|---|
Amplification | |
U5mod | GCA AGC ACG TGA GGC AGC G |
U3mod | GCG TAT GGA TCA CGA GAA AA |
1Fmod2 | GTA TTC TGC AGT CTG CTC TTA G |
1Rmod | CTT AGT GCT TCA GCG GTC AG |
1R2mod | GCG TAG GAA ACT TAG AAC TA |
1R4mod | CAT ACT GCA CTG CAC TCA TCC |
1R7mod | ATA TCT GCT CCA TAC CAC TG |
2F1mod | CAC TGA AGT GGT TGC TGT AA |
2R1mod | GAA TAT AAA GCC TCA TGT AAC G |
2F1neu | CAA GAG ACA ACT CTG GCT TTT |
3Fmod | GCT GCA AGC CGC TCC ATT CT |
4F2neu | CAG AAG GAT TAC AGG GAG CA |
4R1mod | CTT TGA GGA GCT TCT GGT TG |
4Rneu | GGA TCC TGC TTT GCC TTT TC |
Sequencing | |
FvL ankU1 | CAC TCC GCT TCA TAT TGC TA |
FvL ankU2 | ACT CCT GAG TCT GTT GTA AA |
FvL ankU3 | TAA CAC ATC CTC TTT CAA CC |
FvL ank1 | GAA GAA ATT ACA ACT CCT GAA |
FvL ank2 | GCA GCT GCT AAT GGT GAC GG |
FvL ank3 | TAT CAT CCT TGG GTA GTG G |
U3 Seq1 | GCT CAG GTT CCC CAG AAG TA |
U3 Seq2 | AAT TTT GGC TAT CAT TAG AAG AT |
U3 Seq3 | GAA CAC CCT CAA TCA ACA TC |
U3 Seq4 | CAT CTC CAG TGA CAG GTG TA |
2F1neu Seq1 | GGA TCT ATG GAT GAA CAA GG |
2F1neu Seq2 | ATT AAC AAG TGC CAG GTG TAA |
2F1neu Seq3 | CAG TAA TGA TTC TCC GCT TG |
2F1neu Seq4 | GTA TCA CCA GAA TGT TTC CT |
3Fmod Seq1 | CCA TTT GCT CTT TGC TGA GAA |
3Fmod Seq2 | CTG GGG CAA CAG CAT CAG T |
3Fmod Seq3 | CAC TGG AGA ATA AAG AAG TAG G |
3Fmod Seq4 | ATG CAA CAG TGA AAA AGG GTC |
3Fmod Seq5 | CTT TTT GAG AAG TAT CAC TC |
3Fmod Seq6 | GCT GAA GGT CTA GGA ACG CC |
4F1neu Seq1 | GTC AGC ATA GAT AGA TTC AGG |
4F1neu Seq2 | AGA AGA AAT AGA TTC CCA AGT A |
4F1neu Seq3 | GCC TAT CTA CGA GGA CAT TA |
4F1neu Seq4 | TAG AAG AGC GTG TCC AAG TA |
4F1neu Seq5 | TCT TTC TTC TTA ACC ACA GAT A |