TABLE 1.
Isolate | Host of origina | Distribution of alleles at the nine loci studied
|
ST | ERIC type | AP type | IRS type | PFGE type | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
16S | batR | eno | gltA | ftsZ | groEL | nlpD | ribC | rpoB | |||||||
49882 (H-1) | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | 1 |
49793 | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 1 | 1 |
BH2 | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 1 | 1 |
BH3 | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | NTb |
BH5 | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | 1 |
HC54 | F | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | 1 |
JR1 | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | 3 |
JR3 | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | 3 |
JR5 | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | 3 |
JR6 | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | 3 |
JR7 | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | 3 |
JR8 | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | 3 |
JR9 | H | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | 3 |
NU4695 | F | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 1 | 2 |
RMC3 | F | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 2 | 2 |
RMC10 | F | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | H | 1 | 2 |
JR2 | H | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 2 | 4 | H | 2 | 1 |
HC62 | F | 1 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 3 | 1 | H | 2 | 5 |
HC35 | F | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 4 | 3 | H | 1 | 4 |
HC60 | F | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 4 | 3 | H | 1 | NT |
RMC1 | F | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 4 | 1 | H | 2 | 5 |
RMC8 | F | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 4 | 3 | H | 2 | 5 |
RMC12 | F | 2 | 2 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 4 | 3 | M | 1 | 5 |
NU4714 | F | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 5 | 4 | H | 1 | 5 |
R987 | H | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 5 | 4 | H | 2 | 4 |
R1073 | H | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 5 | 4 | H | 2 | 4 |
BH4 | H | 2 | 3 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 6 | 4 | M | 2 | 6 |
HC48 | F | 2 | 3 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 6 | 2 | M | 2 | 6 |
HC71 | F | 2 | 3 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 6 | 2 | M | 2 | NT |
NU4423 | F | 2 | 3 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 6 | 4 | H | 2 | 6 |
NU4713 | F | 2 | 3 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 6 | 3 | H | 2 | 6 |
RMC2 | F | 2 | 3 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 6 | 6 | M | 2 | 6 |
RMC5 | F | 2 | 3 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 6 | 1 | M | 2 | NT |
RMC7 | F | 2 | 3 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 6 | 5 | M | 2 | 6 |
RMC11 | F | 2 | 3 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 6 | 7 | M | 1 | 6 |
URLLY8 | H | 2 | 3 | 1 | 2 | 2 | 2 | 1 | 1 | 2 | 6 | 4 | M | 2 | 6 |
BERL-2 | F | 2 | 4 | 1 | 2 | 3 | 1 | 2 | 2 | 1 | 7 | 5 | M | 2 | 7 |
H, human infection; F, feline infection.
NT, not tested.