TABLE 6.
Sensitivity and specificity of real-time PCR quantification for UL37x1 polyadenylated and UL37x1-UL37x2 spliced RNAs
| Added amt (pg)a
|
Detected amt (pg)b
|
|||
|---|---|---|---|---|
| Un | PAc | Spd | PA | Sp |
| 55.56 | 0.08 | 0.08 | 0.06 | 0.09 |
| 6.17 | 0.69 | 0.69 | 0.91 | 0.65 |
| 0.69 | 6.17 | 6.17 | 6.52 | 4.87 |
| 0.08 | 55.56 | 55.56 | 42.36 | 44.75 |
Standards were generated by in vitro transcription of cloned UL37 unspliced (Un), UL37x1 PA (PA), and UL37x1-UL37x2 cDNAs. Known amounts of the RNAs were reverse transcribed, and the corresponding cDNAs were serially diluted and added to standard reactions.
Amount detected by real-time PCR analysis using the corresponding primer-probe combinations as shown in Fig. 4.
PA, Target 1 polyadenylated at nt 50998.
Sp, spliced Target 1 (UL37x1-UL37x2).