TABLE 3.
Disease-specific transcripts differentially expressed at 17 dpi
| Functiona and GenBankb | Gene name | Change (n-fold) for:
|
|||
|---|---|---|---|---|---|
| Cas:F43c | Cas:Md | F43:M | Pe | ||
| Acute phase | |||||
| X58861 | Complement component 1, q a | 1.6 | 2.1 | 1.3 | 4.5E-06 |
| M22531 | Complement component 1, q b | 1.8 | 2.7 | 1.5 | 6.8E-06 |
| X66295 | Complement component 1, q c | 1.7 | 2.1 | 1.0 | 2.6E-05 |
| X81627 | Lipocalin 2 | 8.6 | 19.6 | 2.3 | 5.5E-09 |
| AF045887 | Angiotensinogen | 1.7 | 1.7 | 1.0 | 2.6E-09 |
| Apoptosis | |||||
| D83698 | BH3 interacting (with BCL2 family) domain (DP5) | 2.2 | 2.9 | 1.3 | 5.1E-04 |
| AV138783 | Gadd 45 | 1.4 | 1.3 | 0.9 | 8.8E-05 |
| U88909 | Baculoviral IAP repeat-containing 3 (IAP2) | −2.3 | −1.6 | 1.4 | 1.8E-07 |
| Calcium binding | |||||
| X66449 | Calcium binding protein A6 (calcyclin) | 1.6 | 1.8 | 1.1 | 8.7E-04 |
| X59382 | Parvalbumin | 1.7 | 1.4 | 0.8 | 6.5E-03 |
| AB006758 | Protocadherin 7 | 2.1 | 2.9 | 1.4 | 5.7E-05 |
| D13003 | Reticulocalbin | −1.6 | −1.7 | 1.0 | 1.5E-04 |
| X14432 | Thrombomodulin | −1.9 | −2.1 | 0.9 | 1.8E-04 |
| Cell adhesion | |||||
| M70642 | Connective tissue growth factor | 2.9 | 2.4 | 0.9 | 1.1E-04 |
| AA592182 | Nephronectin | 1.5 | 1.6 | 1.1 | 7.3E-03 |
| U47323 | Stromal interaction molecule 1 | 1.5 | 1.4 | 0.9 | 7.4E-06 |
| U83903 | Tumor necrosis factor-induced protein 6 | 2.6 | 1.6 | −1.7 | 8.9E-04 |
| U12884 | Vascular cell adhesion molecule 1 | 2.3 | 3.0 | 1.3 | 3.9E-06 |
| X52046 | Procollagen, type III, alpha 1 | −2.1 | −2.0 | 1.0 | 8.0E-05 |
| M77123 | Vitronectin | −1.4 | −1.5 | 1.0 | 1.3E-04 |
| D50086 | Neuropilin | −1.6 | −1.5 | 1.1 | 1.8E-03 |
| U03419 | Procollagen, type I, alpha 1 | −1.4 | −1.4 | 1.0 | 1.3E-02 |
| L02918 | Procollagen, type V, alpha 2 | −1.5 | −1.5 | 1.0 | 7.3E-03 |
| U16162 | Procollagen-proline 2-oxoglutarate 4-dioxygenase | −1.8 | −2.0 | 0.9 | 3.2E-07 |
| M31811 | Myelin-associated glycoprotein | −1.6 | −1.6 | 1.0 | 7.6E-04 |
| AI132491 | Bystin-like | −1.6 | −1.5 | 1.1 | 3.4E-04 |
| A1853217 | VE-cadherin gene Cdh5 | −1.5 | −1.5 | 1.0 | 1.2E-04 |
| L04678 | Integrin beta 4 | −1.5 | −2.0 | 0.7 | 2.1E-05 |
| Cell cycle | |||||
| U83902 | Mad211 | 1.4 | 1.2 | 0.8 | 5.5E-03 |
| AW048937 | Cyclin-dependent kinase inhibitor 1A (p21) | 5.4 | 4.7 | 0.9 | 6.9E-11 |
| *AI849615f | Growth arrest specific 5 (Gas5) | 1.5 | 1.5 | 1.0 | 1.7E-04 |
| AW121294 | Wnt1 responsive Cdc42 homolog | 1.4 | 1.2 | 0.9 | 2.8E-03 |
| Z67745 | Protein phosphatase 2a, catalytic subunit | 1.5 | 1.6 | 1.1 | 6.7E-04 |
| AW049584 | Protein phosphatase 1, regulatory (inhibitor) 2 | 1.9 | 2.5 | 1.3 | 1.6E-04 |
| D83745 | B-cell translocation gene 3 | 1.4 | 1.8 | 1.3 | 7.1E-04 |
| AI843106 | p53-regulated PA26 nuclear protein | 1.6 | 1.3 | 0.8 | 4.2E-04 |
| *AI849928 | Cyclin D1 | −1.5 | −1.4 | 1.1 | 2.0E-06 |
| M34094 | Midkine | −1.4 | −1.4 | 1.1 | 2.5E-05 |
| Cell growth | |||||
| AI842277 | Insulin-like growth factor binding protein 3 | 2.2 | 2.4 | 1.1 | 7.3E-04 |
| Endocytosis | |||||
| D86066 | Rabaptin 5 | −1.5 | −1.5 | 1.0 | 2.4E-04 |
| AI747654 | Caveolin, caveolar protein, 22 kDa | −1.7 | −1.6 | 1.1 | 1.4E-05 |
| Cytoskeleton | |||||
| L29468 | Cofilin 2, muscle | 1.5 | 1.4 | 0.9 | 4.1E-03 |
| X57377 | Myosin Va | 1.9 | 1.9 | 1.0 | 1.1E-04 |
| AV170878 | Rhotekin | 1.6 | 1.4 | 0.9 | 9.6E-06 |
| J04953 | Gelsolin | −2.2 | −2.0 | 1.1 | 3.3E-09 |
| AA657164 | Rab6, kinesin-like | −1.7 | −1.7 | 1.0 | 2.0E-03 |
| Creatine biosynthesis | |||||
| AI844626 | Glycine amidinotransferase | −1.6 | −1.6 | 1.0 | 5.6E-08 |
| AF010499 | Guanidinoacetate methyltransferase | −1.5 | −1.4 | 1.1 | 2.9E-04 |
| Glycolysis/glucose metabolism | |||||
| Z11911 | Glucose-6-phosphate dehydrogenase X-linked | 1.6 | 1.3 | 0.8 | 6.5E-03 |
| J03928 | Phosphofructokinase, liver, B-type | −1.4 | −1.5 | 0.9 | 3.9E-06 |
| X13586 | 2,3-Bisphosphoglycerate mutase | −1.4 | −1.3 | 1.1 | 6.9E-05 |
| GTP binding | |||||
| AF009246 | RAS, dexamethasone-induced 1 | 1.5 | 1.9 | 1.3 | 1.6E-03 |
| AW061337 | Adenylate kinase 4 | −1.4 | −1.7 | 0.9 | 9.1E-08 |
| ER | |||||
| AA615951 | Dolichyl-phosphate beta-glucosyltransferase | 1.5 | 1.5 | 1.0 | 6.8E-04 |
| AI642389 | Similar to KDEL. ER protein retention receptor 3 | 1.6 | 1.9 | 1.2 | 6.6E-06 |
| AI851230 | Homolog to ER lumen protein retaining receptor 1 | −1.5 | −1.2 | 1.2 | 7.4E-04/PICK> |
| Heat shock response/protein folding | |||||
| D85904 | Heat shock protein, 110 kDa | 1.4 | 1.6 | 1.1 | 6.9E-05 |
| U16959 | FK506 binding protein 5 (51 kDa) | 1.6 | 1.6 | 1.0 | 1.0E-04 |
| AI852161 | Tubulin-specific chaperone | 1.6 | 1.2 | 0.8 | 1.7E-04 |
| *X60676 | Heat shock protein 47, member 1 (Hsp47) | −2.6 | −2.6 | 1.0 | 1.8E-06 |
| L40406 | Heat shock protein, 105 kDa | −1.6 | −1.9 | 0.8 | 1.5E-05 |
| *AA615831 | Rat ischemia responsive 94-kDa protein | −1.6 | −1.6 | 1.0 | 4.0E-06 |
| AW122022 | Peptidylprolyl isomerase D (cyclophilin D) | −1.5 | −1.7 | 0.9 | 1.3E-06 |
| Immune response | |||||
| AV370035 | Chemokine (C-C) receptor 5 | −2.8 | −1.7 | 1.6 | 4.5E-04 |
| AV139913 | Stromal cell-derived factor 1 | −3.1 | −2.9 | 1.1 | 4.8E-05 |
| AF081789 | Lymphocyte antigen 68 | −1.4 | −1.3 | 1.0 | 1.1E-06 |
| Lipid/cholesterol metabolism | |||||
| Z19521 | Low-density lipoprotein receptor | −1.4 | −1.5 | 0.9 | 2.4E-05 |
| AB016248 | Sterol-C5-desaturase homolog (Saccharomyces cerevisiae) | −1.8 | −1.7 | 1.1 | 2.8E-03 |
| AW106745 | NAD(P)-dependent steroid dehydrogenase-like | −1.7 | −1.7 | 1.0 | 6.2E-09 |
| AW122653 | Mevalonate kinase | −1.4 | −1.4 | 1.0 | 7.8E-03 |
| D29016 | Farnesyl diphosphate farnesyl transferase 1 | −1.5 | −1.5 | 1.0 | 1.5E-06 |
| AW122260 | Cytochrome P450, 51 | −1.7 | −1.9 | 0.9 | 7.8E-05 |
| Al848668 | Sterol-C4-methyl oxidase-like | −1.9 | −2.1 | 0.9 | 1.0E-05 |
| Al846851 | Farnesyl pyrophosphate synthase | −1.8 | −1.7 | 1.1 | 1.1E-05 |
| AF057368 | 7′-Dehydrocholesterol reductase | −1.8 | −1.7 | 1.0 | 1.9E-04 |
| D42048 | Squalene epoxidase | −1.7 | −1.7 | 1.0 | 7.0E-07 |
| AW122523 | Long-chain fatty-acyl elongase | −2.1 | −2.0 | 1.1 | 2.5E-07 |
| AW060927 | 2,3-Oxidosqualene: lanosterol cyclase | −2.3 | −2.2 | 1.0 | 1.1E-06 |
| U48896 | UDP-glucoronosyltransferase 8 | −2.1 | −2.2 | 1.0 | 1.1E-06 |
| U28960 | Phospholipid transfer protein | −1.8 | −1.8 | 1.0 | 1.0E-06 |
| X95279 | Thyroid hormone responsive SPOT14 homolog | −1.5 | −1.7 | 0.9 | 2.4E-05 |
| M72394 | Phospholipase A2, group IV | −3.0 | −2.9 | 1.0 | 1.5E-07 |
| AW212131 | Choline phosphotransferase 1 | 1.5 | 1.8 | 1.2 | 7.2E-03 |
| U44389 | Hydroxyprostaglandin dehydrogenase 15 (NAD) | 1.9 | 2.4 | 1.3 | 1.5E-03 |
| Lysosome | |||||
| M32017 | Lysomal membrane glycoprotein 2 | 1.4 | 1.4 | 1.0 | 6.8E-06 |
| AV356071 | Lysosome-associated protein transmembrane 5 | 1.4 | 1.6 | 1.1 | 1.7E-03 |
| U87240 | Mannosidase 2, alpha B1 | 1.5 | 1.5 | 1.0 | 2.2E-05 |
| Nucleosome assembly | |||||
| X13605 | H3 histone, family 3B | 1.4 | 1.4 | 1.0 | 1.9E-02 |
| X05862 | H2B and H2A histone genes | −1.5 | −1.4 | 1.1 | 2.5E-06 |
| X61449 | Nucleosome assembly protein 1-like 1 | −1.5 | −1.6 | 1.0 | 1.2E-06 |
| Neurogenesis/survival | |||||
| U81317 | Myelin-associated oligodendrocytic basic protein | −2.7 | −2.3 | 1.2 | 3.0E-04 |
| U04827 | Fatty acid binding protein 7, brain | −1.7 | −1.2 | 1.4 | 2.5E-05 |
| AB017270 | Tmeff2 | −2.1 | −2.2 | 1.0 | 1.1E-07 |
| Polyamine biosynthesis | |||||
| L10244 | Spermidine/spermine N1-acetyl transferase | 2.2 | 2.1 | 1.0 | 3.8E-07 |
| Proteinase inhibitor | |||||
| X93037 | Extracellular proteinase inhibitor | 5.0 | 6.7 | 1.4 | 3.9E-11 |
| X70393 | Inter-alpha trypsin inhibitor, heavy chain 3 | 1.5 | 1.4 | 0.9 | 1.4E-04 |
| M64086 | Serine protease inhibitor 2-2 | 1.7 | 1.7 | 1.0 | 1.1E-07 |
| U26437 | Tissue inhibitor of metalloproteinases-3 | 1.5 | 1.3 | 0.9 | 1.2E-04 |
| Protein biosynthesis | |||||
| U10118 | Endothelial monocyte-activating polypeptide 2 | 1.4 | 1.3 | 0.9 | 1.0E-03 |
| AW125491 | Eukaryotic translation initiation factor 2, subunit 2 | 1.7 | 1.7 | 1.0 | 2.9E-03 |
| AI132207 | Eukaryotic translation initiation factor 1A | 1.6 | 1.7 | 1.0 | 2.3E-03 |
| AI839632 | Eukaryotic translation elongation factor 1 delta | 1.4 | 1.4 | 0.9 | 2.4E-03 |
| *Z50159 | Suil | 1.5 | 1.3 | 0.9 | 7.7E-05 |
| AI835709 | Ribosomal protein S25 | 2.0 | 1.5 | 0.8 | 9.1E-03 |
| AW048899 | Ribosomal protein S19 | 1.4 | 1.4 | 1.0 | 3.1E-03 |
| AW125120 | Mitochondrial ribosomal protein S25 | −1.5 | −1.3 | 1.1 | 2.3E-03 |
| C77227 | Mitochondrial ribosomal protein S25 | −1.4 | −1.4 | 1.0 | 7.8E-04 |
| Protein kinase/phosphatase | |||||
| AW046181 | Serum/glucocorticoid-regulated kinase | 3.8 | 2.9 | 0.8 | 2.1E-08 |
| AF039574 | Serine/threonine kinase 2 | 1.5 | 1.6 | 1.0 | 4.2E-05 |
| D45859 | Protein phosphatase 1B | 3.0 | 3.0 | 1.0 | 1.3E-04 |
| AI849109 | Dual specificity protein phosphatase 9 | −1.5 | −1.7 | 0.9 | 5.6E-05 |
| AF062076 | Serine/threonine kinase 16 | −1.5 | −1.6 | 0.9 | 9.4E-06 |
| M95408 | PTK2 protein tyrosine kinase 2 | −1.6 | −1.6 | 1.0 | 1.6E-05 |
| AV235418 | Tyrosine kinase receptor 1 | −1.7 | −1.5 | 1.1 | 3.3E-05 |
| X71426 | Endothelium-specific receptor tyrosine kinase | −1.5 | −1.6 | 1.0 | 4.5E-03 |
| AF077659 | Homeodomain interacting protein kinase 2 | −1.6 | −1.4 | 1.1 | 2.6E-04 |
| Protein degradation/proteolysis | |||||
| AI242663 | Cathepsin Z | 2.6 | 2.5 | 1.0 | 2.2E-06 |
| AI851255 | Cathepsin B | 1.7 | 1.7 | 1.0 | 2.4E-05 |
| AI848382 | Ubiquitin-specific protease 1 | 1.4 | 1.3 | 1.0 | 5.0E-03 |
| AI846522 | Ubiquitin-specific protease 2 | 1.7 | 1.5 | 0.9 | 1.1E-06 |
| AW228316 | Hypothetical serine protease | 1.5 | 1.4 | 0.9 | 6.1E-03 |
| AI746365 | Beta-transducin repeat containing protein | −1.6 | −1.5 | 1.0 | 4.4E-04 |
| AA726223 | a disintegrin and metalloproteinase domain 19 | −1.7 | −1.7 | 1.0 | 1.0E-05 |
| RNA binding/processing | |||||
| AB016424 | RNA binding motif protein 3 | 1.9 | 2.3 | 1.2 | 5.3E-06 |
| AI226368 | Heterogenous nuclear ribonucleoprotein D-like | 1.8 | 1.8 | 1.0 | 1.2E-04 |
| U11274 | Heterogenous nuclear ribonucleoprotein D | 1.6 | 2.0 | 1.3 | 4.1E-04 |
| AI183202 | Heterogenous nuclear ribonucleoprotein A1 | 2.2 | 2.0 | 0.9 | 1.4E-03 |
| AI840643 | Heterogenous nuclear ribonucleoprotein K | 1.4 | 1.3 | 0.9 | 2.8E-03 |
| *AA684508 | RNA, U22 small nucleolar (Rnu22) | 1.5 | 1.5 | 1.0 | 3.0E-06 |
| AW227345 | U2 small nuclear ribonucleoprotein polypeptide A | 1.7 | 1.7 | 1.0 | 1.2E-02 |
| AF073993 | Heterogenous nuclear ribonucleoprotein A2/B1 | −1.5 | −1.5 | 1.0 | 9.1E-06 |
| AI846595 | Homolog to splicing factor, arginine/serine-rich 6 | −1.9 | −1.5 | 1.3 | 7.8E-05 |
| U65735 | Elavll | −1.4 | −1.3 | 1.1 | 2.9E-05 |
| Scrapie | |||||
| AJ223206 | Scrapie-responsive gene 1 | 1.9 | 2.0 | 1.1 | 1.5E-09 |
| Cell signaling | |||||
| AJ001418 | Pyruvate dehydrogenase kinase 4 | 1.5 | 1.5 | 1.0 | 9.0E-03 |
| AB015978 | Oncostatin receptor | 2.0 | 1.9 | 1.0 | 8.2E-08 |
| AJ010045 | Neuroepithelial cell transforming gene 1 | 1.8 | 1.4 | 0.8 | 1.2E-03 |
| AW123650 | Gap junction membrane channel protein beta 6 | 1.8 | 1.5 | 0.9 | 4.5E-05 |
| X84215 | Gap junction membrane channel protein beta 1 | −1.5 | −1.4 | 1.1 | 4.3E-04 |
| AF105222 | Leukemia-associated gene-like | −1.6 | −1.6 | 1.0 | 2.2E-05 |
| Transcription regulation | |||||
| *U19118 | Activating transcription factor 3 (ATF3) | 2.4 | 2.6 | 1.1 | 5.4E-08 |
| X61800 | CCAAT/enhancer binding protein (C/EBP), delta | 2.1 | 2.1 | 1.0 | 1.7E-05 |
| M61007 | CCAAT/enhancer binding protein (C/EBP), beta | 3.0 | 3.2 | 1.1 | 4.9E-03 |
| AW045443 | Myocyte enhancer factor 2A | 1.5 | 1.6 | 1.1 | 7.6E-04 |
| AI848050 | Kruppel-like factor 9 | 1.4 | 1.4 | 1.0 | 2.2E-03 |
| M28845 | Early growth response 1 | 1.6 | 1.3 | 1.0 | 7.7E-05 |
| X63866 | Cellular nucleic acid binding protein | 1.4 | 1.3 | 1.0 | 2.3E-03 |
| *U20344 | Kruppel-like factor 4 (gut) (GKLF) | 1.6 | 1.5 | 0.9 | 9.1E-03 |
| U60453 | Enhancer of zeste homolog 1 (Drosophila) | 1.4 | 1.3 | 0.9 | 7.7E-05 |
| *AI843895 | Ethanol-induced 6 (Srebpl) | 1.4 | 1.4 | 1.0 | 9.2E-09 |
| AF038848 | Transcriptional regulator, S1N3B (yeast) | 1.5 | 1.4 | 1.0 | 4.6E-06 |
| *A67083 | CHOP/GADD153 | 3.6 | 3.5 | 1.0 | 4.6E-05 |
| U79748 | MAD homolog 4 (Drosophila) | 1.5 | 1.3 | 0.9 | 1.2E-02 |
| AF022992 | Period homolog (Drosophila) | 3.8 | 2.3 | −1.7 | 2.3E-06 |
| Y18505 | Mus musculus mRNA for XAP-5 protein | 1.5 | 1.5 | 1.0 | 9.0E-05 |
| U183148 | NFIL3/E4BP4 | 1.8 | 1.7 | 1.0 | 4.8E-06 |
| AB023485 | TATA box binding protein, Taf2s | 1.6 | 1.5 | 0.9 | 2.2E-04 |
| AI842969 | TAF9 RNA polymerase II | 1.5 | 1.7 | 1.1 | 1.4E-03 |
| AI553024 | Zinc finger gene PLZF | 2.9 | 2.0 | 0.7 | 1.6E-08 |
| U57524 | I kappa B alpha gene | 1.8 | 1.6 | 0.9 | 5.1E-04 |
| AW047554 | Zinc finger protein 96 | 2.2 | 1.7 | 0.8 | 8.1E-07 |
| AF017085 | General transcription factor II 1 | −1.5 | −1.5 | 1.0 | 8.2E-07 |
| U31566 | NK2 transcription factor related, locus 2 | −1.7 | −1.5 | 1.2 | 2.1E-05 |
| AF047389 | SRY box containing gene 10 | −1.4 | −1.3 | 1.1 | 6.8E-05 |
| L38607 | Forkhead box D1 | −1.6 | −1.5 | 1.0 | 4.9E-04 |
| AF043220 | General transcription factor II 1 | −1.5 | −1.3 | 1.2 | 1.9E-03 |
| L35032 | SRY-box containing gene 18 | −1.7 | −1.6 | 1.0 | 1.2E-02 |
| AW124932 | Pre B-cell leukemia transcription factor 1 | −1.9 | −1.9 | 1.0 | 3.2E-08 |
| AF015260 | MAD homolog 7 (Drosophila) | −1.6 | −1.5 | 1.1 | 8.0E-05 |
| AW046227 | WD40 protein Ciao 1 | −1.4 | −1.7 | 0.9 | 3.2E-04 |
| Transport | |||||
| *M22998 | Solute carrier family 2 member 1 (Glut 1) | 2.0 | 1.6 | 0.8 | 1.9E-07 |
| AI845514 | ATP-binding cassette, subfamily A (ABC1) | 2.3 | 2.2 | 1.0 | 1.9E-05 |
| AI853978 | Similar to solute carrier family 21 member 11 | −1.6 | −1.8 | 0.9 | 9.4E-08 |
| Miscellaneous | |||||
| AI854154 | 89% identical to Human ACP33 | 1.6 | 1.4 | 0.9 | 1.6E-04 |
| AW125865 | Histocompatibility antigen | 1.5 | 1.6 | 1.0 | 1.5E-03 |
| AW046124 | Cytochrome b-245, alpha-polypeptide | 1.5 | 1.7 | 1.1 | 1.7E-04 |
| U883327 | Cytokine-inducible SH2-containing protein 2 | 1.5 | 1.6 | 1.1 | 9.5E-03 |
| AI854020 | Cytosolic cysteine dioxygenase 1 | 1.4 | 1.4 | 1.0 | 4.0E-04 |
| X15591 | Cytotoxic-T-lymphocyte-associated protein 2 alpha | 1.6 | 1.9 | 1.2 | 2.1E-03 |
| AI326963 | Fibrinogen/angiopoietin-related protein | 1.6 | 1.6 | 1.0 | 9.7E-04 |
| AI844178 | HLA-B-associated transcript 3 | 2.0 | 1.3 | −1.5 | 8.7E-03 |
| V00756 | Interferon-related developmental regulator 1 | 1.4 | 1.6 | 1.1 | 3.0E-03 |
| C85523 | MLV VLeco LTRg | 1.7 | 1.6 | 0.9 | 2.8E-04 |
| AW125442 | Protein kinase inhibitor, alpha | 1.5 | 1.6 | 1.1 | 1.2E-03 |
| *AF063095 | Sell (suppressor of lin-12) 1 homolog (C. elegans) | 1.7 | 1.6 | 0.9 | 2.7E-04 |
| AI853531 | Similar to rat gene 33 polypeptide (GO) | 1.4 | 1.2 | 0.8 | 1.4E-04 |
| AF077527 | Syndecan binding protein | 1.7 | 1.4 | 0.8 | 5.4E-04 |
| D29797 | Syntaxin 3 | 1.4 | 1.5 | 1.1 | 7.8E-04 |
| X52102 | Synaptotagmin interacting protein | 1.4 | 1.4 | 0.9 | 2.3E-03 |
| Z70023 | Gap junction membrane channel protein beta 6 | 1.5 | 1.5 | 1.0 | 5.1E-03 |
| AW212859 | Axotrophin | 1.4 | 1.5 | 1.1 | 1.7E-02 |
| AA790056 | Cysteine- and histidine-rich protein | 1.8 | 1.9 | 1.0 | 1.7E-03 |
| AA674143 | Rattus norvegicus synaptojanin 2 binding protein | −1.5 | −1.6 | 0.9 | 3.9E-06 |
| AW061161 | Asparaginase-like sperum autoantigen | −1.7 | −1.7 | 1.0 | 4.7E-06 |
| L16992 | Branched chain ketoacid dehydrogenase E1, beta | −1.4 | −1.4 | 1.1 | 2.3E-03 |
| X99641 | Chromobox homolog 5 (Drosophila HP1a) | −1.4 | −1.3 | 1.1 | 8.7E-05 |
| U82758 | Claudin 5 | −1.7 | −1.4 | 1.2 | 1.5E-03 |
| *D16333 | Coproporphyrinogen oxidase (Cpo) | −1.7 | −1.8 | 0.9 | 1.1E-07 |
| AW122453 | Cys- and His-rich domain (CHORD)-containing | −1.8 | −2.1 | 0.9 | 3.3E-07 |
| D88792 | Cysteine-rich protein 2 | −1.6 | −2.0 | 0.8 | 4.2E-05 |
| AI842825 | Glycolipid transfer protein | −1.6 | −1.5 | 1.1 | 5.8E-06 |
| U18773 | GPI-anchored membrane protein 1 | −1.6 | −1.4 | 1.1 | 3.4E-05 |
| AI839882 | Homolog to oligo-RNase | −1.8 | −1.7 | 1.1 | 1.3E-06 |
| AI465543 | Homolog to protein ad-004 (protein cgi-137) | −1.7 | −2.0 | 0.9 | 1.9E-04 |
| AI843232 | Succinyl-coa: 3-ketoacid-coenzyme a transferase | −1.7 | −1.9 | 0.9 | 2.6E-05 |
| AF079528 | Immediate early response 5 | −1.4 | −1.5 | 1.0 | 6.0E-04 |
| AI850297 | Junction cell adhesion molecule 2 | −2.0 | −2.6 | 0.8 | 1.1E-05 |
| D16141 | Lethal giant larval homolog | −1.5 | −1.4 | 1.1 | 3.2E-07 |
| AW124555 | Methylmalonyl CoA epimerase (MCEE), mRNA | −1.4 | −1.5 | 1.0 | 4.8E-05 |
| AF060883 | Mucin 14, endothelial | −1.4 | −1.5 | 1.0 | 3.2E-04 |
| AI850965 | NADPH oxidase homolog | −1.4 | −1.4 | 1.0 | 1.5E-05 |
| AA986258 | Phosphorylated adaptor for RNA export | −1.4 | −1.4 | 1.0 | 3.1E-04 |
| AV319920 | Protein kinase WNK1 (WNK1) mRNA | −1.7 | −2.0 | 0.9 | 9.4E-03 |
| U35374 | Purine-nucleoside phosphorylase | −1.5 | −1.4 | 1.1 | 6.0E-04 |
| AI592541 | Ret finger protein 2 | −1.4 | −1.4 | 1.0 | 8.6E-04 |
| AA716963 | Similar to isopentenyl-diphosphate delta | −2.7 | −2.6 | 1.0 | 1.3E-07 |
| AI854285 | Similar to kelch family protein Ndl-L | −1.5 | −1.6 | 0.9 | 2.5E-04 |
| *U44088 | T-cell death associated gene (Tdag) | −1.5 | −1.4 | 1.1 | 2.5E-05 |
| X70956 | Topoisomerase (DNA) I | −1.5 | −1.5 | 1.0 | 1.3E-04 |
| U67611 | Transaldolase 1 | −1.6 | −1.5 | 1.1 | 1.1E-05 |
| AF061516 | Vesicle-associated membrane protein 4 | −1.7 | −1.9 | 0.9 | 1.9E-05 |
a
Function based on GO annotation (3) or deduced from relevant literature.
b
GenBank accession numbers.
c
Changes (n-fold) in pathogenic versus nonpathogenic viruses.
d
Mock inoculated.
e
Calculated with ANOVA FDR < 5%.
f
*, gene involved in ER stress.
g
LTR, long terminal repeat.