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. 2009 Jan 23;4(1):e4259. doi: 10.1371/journal.pone.0004259

Table 1. Yeast Strains Used in this Study.

Strain/Plasmid Relevant Genotype Origin
WT BY4741 (MATa his3Δ1 leu2Δ0 ura3Δ0 met15Δ0) [68]
Ubp2-TAP MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 UBP2::TAP-HIS3 [69]
Rup1-TAP MATa his3Δ1 leu2Δ0 met15Δ0 ura3Δ0 RUP1::TAP-HIS3 [69]
ubp2 Δ ubp2Δ::NATMX, derived from Y3656 (MATα can1Δ::MFA1pr-HIS3-MFα1pr-LEU2 his3Δ leu2Δ0 ura3Δ0 met15Δ0 lys2Δ0) This study, [70]
ubp2 Δ MATa his3Δ1 leu2Δ0 ura3Δ0 met15Δ0 ubp2Δ::KanMX3 [25]
rup1 Δ rup1Δ::NATMX, derived from Y3656 (MATα can1Δ::MFA1pr-HIS3-MFα1pr-LEU2 his3Δ leu2Δ0 ura3Δ0 met15Δ0 lys2Δ0) This study, [70]
rup1 Δ MATa his3Δ1 leu2Δ0 ura3Δ0 met15Δ0 rup1Δ::KanMX3 [25]
rup1 Δ rup1Δ::NATMX, derived from FY56 (MATα his4-912 ΔR5 lys2-128Δ ura3-52) This study, [71]
Ubp2-TAP rup1 Δ MATa UBP2::TAP-HIS3, rup1Δ::NATMX This study
Rup1-TAP ubp2 Δ MATa RUP1::TAP-HIS3, ubp2Δ::NATMX This study
rsp5-1 FW1808 (MATα his4-912 ΔR5 lys2-128Δ ura3-52 rsp5-1) [71]
rsp5-326 MATa leu2-3,112 ura3-52 his3-Δ200 trp1-Δ901 ade2-101 suc2-Δ9 [35]
ubp2 Δ rsp5-1 ubp2Δ::KanMX3 rsp5-1 This study, [71]
rup1 Δ rsp5-1 rup1Δ::KanMX3 rsp5-1 This study, [71]
fur4 Δ MATa his3Δ1 leu2Δ0 ura3Δ0 met15Δ0 fur4Δ::KanMX3 [25]
end3 Δ MATa his3Δ1 leu2Δ0 ura3Δ0 met15Δ0 end3Δ::KanMX3 [25]
vps37 Δ vps37::HIS This study
vps37 Δ ubp2 Δ vps37::HIS ubp2Δ::KanMX3 This study