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. Author manuscript; available in PMC: 2009 May 1.
Published in final edited form as: Anal Biochem. 2007 Dec 27;376(1):13–24. doi: 10.1016/j.ab.2007.12.025

Table 1.

Peptides identified from LC-ES-MS/MS analysis of CNBr cleavage followed by trypsin digestion of the precipitated NTS1 receptor. Letters in bold correspond to TM domains. Overlapping peptides are not shown. Formyl = formylation, Hse_lact = homoserine lactone, ox = oxidation and * = carbamidomethylation.

Peptide sequence Residue number Experimental mass (m/z) Theoretical mass (m/z) Mass Accuracy (ppm) Charge state
SGSTSESDTAGPNSDLDVNTDIYSK 1–25 1280.568 1280.562 4.3 2+
VLVTAIYLALFVVGTVGNSformylVTAFTLAR 26–52 941.877 941.872 4.7 3+
SLQ SLQSTVHY 55–65 631.824 631.822 2.0 2+
LLILLLAMHse_lact 75–82 851.600 851.597 3.9 1+
PVELYNFIWVHHPWAFGDAGC*R 83–104 668.574 668.572 2.8 4+
GYYFLR 105–110 409.713 409.713 0 2+
DAC*TYATALNVASLSVER 111–128 970.977 970.972 4.3 2+
DAC*TYATALNVASLSVERYLAIC*HPFK 111–137 1024.181 1024.176 5.0 3+
YLAIC*HPFK 129–137 574.800 574.800 0 2+
LASALLAIPMoxLFTMoxGLQNR 156–174 1046.572 1046.568 3.8 2+
LFTMoxGLQNR 166–174 548.285 548.285 0 2+
SGDGTHPGGLVC*TPIVDTATVK 175–196 728.033 728.032 2.1 3+
VVIQVNTFMHse_lact 197–205 1002.563 1002.562 1.3 1+
SFLFPMHse_lact 206–211 693.362 693.361 2.5 1+
LVISILNTVIANK 212–224 699.442 699.440 3.0 2+
LTVMVHQAAEQGR 225–237 720.376 720.375 1.4 2+
VC*TVGTHNGLEHSTFNMHse_lact 238–254 928.425 928.423 2.4 2+
VC*TVGTHNGLEHSTFNMoxTIEPGR 238–260 858.402 858.401 1.8 3+
HGVLVLR 266–272 397.256 397.256 0 2+
AVVIAFVVC*WoxLPYHVR 273–288 973.034 973.029 4.5 2+
FYHYFYMHse_lact 307–313 511.725 511.724 1.9 2+
LTNALFYVSSAINPILYNLVSANFR 314–338 1400.763 1400.755 5.3 2+
QVFLSTLAC*LC*PGWR 339–353 904.457 904.453 4.5 2+
KformylRPTFSR 358–364 307.175 307.175 0 3+
KPNSMoxSSNHAFSTSATR 365–381 613.620 613.620 0 3+
SformylSNHAFSTSATR 370–381 647.295 647.295 0 2+
ENLYFQ 382–387 813.378 813.378 0 1+