Table 3. Polymorphism summaries.
Sample | ni | ns | S | π | θ | DT | FS | R2 | ||
Barra de Guaratiba | 24 | 24 | 0 | 0 | - | 0 | - | - | - | - |
Estrela 1S | 15 | 22 | 33 | 0.0225 | (0.000025) | 0.0343 | (0.000158) | −1.4748 | −2.0760 | 0.0888 |
Estrela 2S | 21 | 30 | 30 | 0.0187 | (0.000009) | 0.0286 | (0.000101) | −1.3976 | −6.7757 | 0.0724 |
Jaíba 1S | 10 | 17 | 20 | 0.0221 | (0.000003) | 0.0222 | (0.000082) | −0.2059 | −7.7875 | 0.1216 |
Jaíba 2S | 10 | 15 | 18 | 0.0178 | (0.000005) | 0.0208 | (0.000077) | −0.5816 | −3.5445 | 0.1058 |
Marajó | 4 | 5 | 12 | 0.0196 | (0.000044) | 0.0217 | (0.000145) | −0.7031 | 2.3849 | 0.2102 |
Mesquita* | 3 | 4 | 4 | 0.0088 | (0.000008) | 0.0082 | (0.000031) | - | - | - |
Pancas | 24 | 27 | 20 | 0.0134 | (0.000003) | 0.0195 | (0.000054) | −0.5378 | −9.2388 | 0.0792 |
Teresina | 17 | 18 | 14 | 0.0137 | (0.000004) | 0.0153 | (0.000043) | −0.4034 | −4.8773 | 0.1177 |
ni, number of individuals and ns, number of DNA sequences of the samples (see Methods for further details); S number of polymorphic sites; π, average number of pair-wise differences; θ, neutral parameter, based on the number of segregating sites. Variances of π and θ values are shown in brackets. DT, Tajima's D [54]; FS, Fu's FS [55] and R2, Ramos-Onsins and Rozas' R2 [56]. *The Mesquita sequences were derived from the F1 of a single female and therefore no tests were carried out with this sample.