Table 4. A comparison of the base-pair parameters propeller twist and buckle of the hexamer with those of d(CGCGCG)2 (NDB code ZDF001) and d(CGCACG)·d(CGTGCG) (NDB code ZDF038).
Deviating values are shown in bold.
| Sequence | Base pair | Propeller twist (°) | Buckle (°) |
|---|---|---|---|
| d(CGCGCG)2 | C1·G12 | −1.31 | 1.28 |
| d(CGCACG)·d(CGTGCG) | C1·G12 | 7.44 | −6.02 |
| d(CACACG)·d(CGTGTG) | C1·G12 | 8.19 | 1.14 |
| d(CGCGCG)2 | G2·C11 | −3.80 | −6.43 |
| d(CGCACG)·d(CGTGCG) | G2·C11 | −6.13 | 0.04 |
| d(CACACG)·d(CGTGTG) | A2·T11 | 5.40 | 0.61 |
| d(CGCGCG)2 | C3·G10 | −7.22 | 4.49 |
| d(CGCACG)·d(CGTGCG) | C3·G10 | −3.24 | −4.93 |
| d(CACACG)·d(CGTGTG) | C3·G10 | 8.81 | −2.54 |
| d(CGCGCG)2 | G4·C9 | 0.75 | −8.46 |
| d(CGCACG)·d(CGTGCG) | A4·T9 | 5.26 | −3.13 |
| d(CACACG)·d(CGTGTG) | A4·T9 | −0.10 | 21.77 |
| d(CGCGCG)2 | C5·G8 | −0.67 | 0.08 |
| d(CGCACG)·d(CGTGCG) | C5·G8 | −6.10 | 7.22 |
| d(CACACG)·d(CGTGTG) | C5·G8 | −2.23 | 3.37 |
| d(CGCGCG)2 | G6·C7 | 4.29 | 5.44 |
| d(CGCACG)·d(CGTGCG) | G6·C7 | 5.25 | 0.20 |
| d(CACACG)·d(CGTGTG) | G6·C7 | 9.01 | 8.35 |