TABLE 3.
Candidate PMLST genes and their annotations
| Coding sequence | Size (bp) | PMLST sequence size (bp) | Gene function |
|---|---|---|---|
| HCM1.043 | 777 | 356 | Hypothetical protein |
| HCM1.054 | 882 | repA, RepHI1B replication initiation protein, an IncHI1 specific replication protein | |
| HCM1.064 | 876 | 527 | repA2, RepHI1A replication initiation protein, an IncHI1 specific replication protein |
| HCM1.094 | 453 | htdA, IncHI1 transfer repressor | |
| HCM1.099 | 1,509 | 417 | trhW, one of nine trh genes (trhALEKBVCPW) essential for H-pilus production |
| HCM1.107 | 1,857 | trhI, S. enterica serovar Typhi putative ATP-dependent helicase | |
| HCM1.116 | 2,013 | 491 | Hypothetical protein |
| HCM1.177 | 711 | Hypothetical protein | |
| HCM1.178ac | 405 | 403 | Probable DNA-binding protein, contains Pfam match to H-NS histone family |
| HCM1.259 | 516 | 393 | Hypothetical protein, contains Pfam match to transglycosylase SLT domain |
| HCM1.277 | 714 | Possible periplasmic protein | |
| HCM1.280c | 546 | Hypothetical protein | |
| HCM1.286 | 1,206 | Possible DNA-binding protein |