Table 1.
Abundantly Expressed miRNA in Classic Hodgkin Cell Lines.
No. | miRNA | Chromosome | Seed Family* |
1 | miR-15b | 3q26.1 | AGCAGCA |
2 | miR-16 | 3q26.1/13q14.2 | AGCAGCA |
3 | miR-191 | 3p21.31 | |
4 | miR-565 | 3p21.31 | |
5 | miR-103 | 5q35.1/20p13 | |
6 | miR-25 | 7q22 | AUUGCAC |
7 | miR-93 | 7q22 | AAAGUGC |
8 | miR-106b | 7q22 | AAAGUGC |
9 | miR-29a | 7q32.3 | AGCACCA |
10 | miR-29b | 7q32.3/1q32.2 | AGCACCA |
11 | miR-29c | 1q32.2 | AGCACCA |
12 | miR-30b | 8q24.2 | |
13 | Let-7a | 9q22.32/11q24.1/22q13.31 | GAGGUAG |
14 | Let-7f | 9q22.32 | GAGGUAG |
15 | Let-7g | 3p21.1 | GAGGUAG |
16 | miR-17-5p | 13q31 | AAAGUGC |
17 | miR-19a | 13q31 | GUGCAAA |
18 | miR-19b | 13q31 | GUGCAAA |
19 | miR-20a | 13q31 | AAAGUGC |
20 | miR-92a | 13q31/Xq26.2 | AUUGCAC |
21 | miR142-3p | 17q23.2 | |
22 | miR142-5p | 17q23.2 | |
23 | miR-21 | 17q23.2 | |
24 | miR-155 | 21q21 | |
25 | miR-106a | Xq26.2 | AAAGUGC |
26 | miR-20b | Xq26.2 | AAAGUGC |
An miRNA family is composed of miRNA with the same seed region (positions 2 to 8 of the mature miRNA, also called seed+m8) (http://www.targetscan.org). MiRNA are grouped by location and seed family as indicated by altering shades of gray.