Table 2.
Comparison of Murine Mitochondrial DNA Sequences at Three Distinguishing Sites From the MRL/MpJ Mouse.
| Strain or Species | GenBank Accession | tRNA-Met (T3900C) | mt-Nd3 (T9461C) | tRNA-Arg (9821 A -Tract Lengths) |
|---|---|---|---|---|
| MRL/MpJ | this study | HET T and C | ATC | HET - 9, 10, 11, 12, 13A |
| LG/J (Large)* | this study | T | ATC | 10A (HET - small content of 9A) |
| C57BL/6J (Jackson) * | NC_005089 | T | ATT | 8A |
| C3H/HeDiSnLew* | this study | T | ATC | 9A |
| AKR/J* | EF108332 | T | ATC | 9A |
| C57BL/6NTac (Taconic) | this study | T | ATC | 9A |
| NON/Lt | AY533108 | T | ATC | 8A |
| SAMP8 | AB042809 | T | ATC | 8A |
| SAMP1 | AB042524 | T | ATC | 8A |
| SAMR1 | AB042523 | T | ATC | 8A |
| Mus musculus castaneus CAST/EiJ | EF108342 | T | ATC | 8A (and an additional substitution G9861A) |
| LA9 cell line | J01420 | T | ATC | 8A (and an additional substitution G9861A) |
| C3H/He | AB049357 | T | ATC | T+9A (TAAAAAAAAA) |
| C3H/HeJ | EF108335 | T | ATC | T+9A (TAAAAAAAAA) |
| Mus musculus molossinus MOLF/EiJ | EF108345 | T | ATT | 9A (and an additional substitution G9858A) |
| PWD/PhJ | EF108343 | T | ATT | 9A (and an additional substitution G9858A) |
| PWD/Ph | DQ874614 | T | ATT | 9A (and an additional substitution G9858A) |
| Mus musculus molossinus | AY675564 | T | ATT | 9A (and an additional substitution G9858A) |
| NZW/LacJ | EF108341 | T | ATC | 9A |
| KK/HlJ | EF108339 | T | ATC | 9A |
| FVB/NJ | EF108338 | T | ATC | 9A |
| DBA/2J | EF108337 | T | ATC | 9A |
| BALB/cByJ | EF108333 | T | ATC | 9A |
| A/J | EF108331 | T | ATC | 9A |
| 129S1/SvImJ | EF108330 | T | ATC | 9A |
| DD/He | AY836752 | T | ATC | 9A |
| chromosome 1 mt pseudogene | AC116997 | - | ATC | 9A |
| VM | DQ106413 | T | ATC | 9A |
| Balb/Cj | AJ512208 | T | ATC | 9A |
| CBA/J | AY466499 | T | ATC | 9A |
| Mus musculus domesticus | AB042432 | T | ATC | 9A |
| SM/J (Small) | this study | T | ATC | 9A |
| NOD/LtJ | EF108340.1 | T | ATC | 10A |
| BTBR T+ tf/J | EF108334 | T | ATC | 10A |
| NIH/3T3 cell line | AY999076 | T | ATC | 10A |
| 129/Ola | AY836751 | T | ATC | 10A |
| ALS/Lt | AY533106 | T | ATC | 10A |
| C3H/An | AJ489607 | T | ATC | 10A |
| MilP | L07096 | T | ATC | 10A |
| NZB/B1NJ | L07095 | T | ATC | 10A |
| WSB/EiJ | EF108344 | T | ATC | 11 A |
| Swiss-Webster (SW) | this study | T | ATC | HET 10 and 11A, small content of 9 and 12A |
The listed strains may carry many more differences in mitochondrial DNA (e.g. NZB/B1NJ and C57BL/6 differ in 91 nucleotides (Moreno-Loshuertos et al. 2006).
*
The ancestral strains of MRL mouse.