TABLE 2.
Oligonucleotide primers used for qRT-PCR used in this study
| Gene | Orientationa | Primer sequence (5′-3′) |
|---|---|---|
| fimA | F | GTTCTGCTGTCGGTTTTAACATTC |
| R | GGGTTGTTTCTGAACTAAATGTCG | |
| sdiA | F | TGATGAAATAGTGATGACGCCAGAG |
| R | CGTAACAGGCAACCTGGGTCTTATT | |
| tnaA | F | TGAAGAAGTTGGTCCGAATAACGTG |
| R | CTTTGTATTCTGCTTCACGCTGCTT | |
| yjgK | F | GAAGGCAATCGACTGTTTTATCTTA |
| R | AAATGCGATGTCTTTATCAGCTAAC | |
| pgaA | F | GCCAATTTACTCGCAGAAGC |
| R | TGACCAGTTCGGCATGAATA | |
| pgaB | F | AAGCAGATATTTTTAGTCGGGTTG |
| R | AACTTGTGCTCTGACTCTGTCATC | |
| pgaC | F | TTAGCACAGCGTTATGAGAACATT |
| R | ATCAATGCACACCAGATATTCACT | |
| pgaD | F | GATCTGCTGACGGGTTATTACTG |
| R | TCAGGTATTGCTAAGCTCTCTGC | |
| rrsG | F | TATTGCACAATGGGCGCAAG |
| R | ACTTAACAAACCGCTGACTT |
a
F, forward; R, reverse.