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. Author manuscript; available in PMC: 2009 Jan 28.
Published in final edited form as: J Chem Theory Comput. 2008 Oct 14;4(10):1669–1680. doi: 10.1021/ct8002173

Figure 4.

Figure 4

Backbone rmsd of the Trp-Cage miniprotein revealing artifacts in Langevin dynamics. The Trp-Cage miniprotein was simulated in Generalized Born solvent using a Langevin thermostat. Simulations with different segment lengths are plotted in different colors following the legend in Figure 2. Simulations with 1000 and 10 000 steps per segment unfolded within 2 ns and, so, are not visible on the plot.