Table 2.
Self-cleavage rate constants of the wild-type CChMVd (−) and (+) hammerheads and some single and double mutants
Variant | kobs (min−1) | |
---|---|---|
(−) | Wild-type | 2.58 ± 0.11 |
IIa | 2.36 ± 0.28 | |
L1.U6Aa | 0.05 ± 0.01 | |
L1.U6Ga | 0.16 ± 0.02 | |
L1.U6Ca | 0.38 ± 0.06 | |
L1.U6Δa | 0.34 ± 0.05 | |
L1.A4Ga | 2.25 ± 0.41 | |
L1.U1Aa | 0.13 ± 0.02 | |
IL2.A8Ua | 0.066 ± 0.002 | |
L1.U1A/IL2.A8Ua | 1.09 ± 0.07 | |
L1.G2Aa | 0.90 ± 0.19 | |
IL2.C7Ua | 0.59 ± 0.01 | |
L1.G2A/IL2.C7Ua | 0.84 ± 0.04 | |
(+) | Wild-type | 3.33 ± 0.80 |
L1.U6A | 0.049 ± 0.014 | |
L1.U1C | 0.91 ± 0.08 | |
L2.A6G | 2.76 ± 0.72 | |
L1.U1C/L2.A6G | 0.042 ± 0.003 | |
L1.G2A | 0.79 ± 0.09 | |
L2.C5U | 2.18 ± 0.16 | |
L1.G2A/L2.C5U | 0.28 ± 0.07 |
Single mutants with kobs ≤ 0.1 min−1 are shown in bold.
aSmaller version of the (−) hammerhead in which the domain II helix was shortened (Figure 1A).