TABLE 2.
TRANSCRIPTS ENRICHED IN SURFACE EPITHELIAL CELLS
| Probe Name | Gene | Gene Title | Max Fold Change | P Value |
|---|---|---|---|---|
| 204351_at | S100P | S100 calcium binding protein P | 41.0 | 8.42×10−8 |
| CD365047_s_at, 204268_at | S100A2 | S100 calcium binding protein A2 | 21.2 | 6.67×10−5 |
| 233157_x_at | FLJ32926 | Hypothetical protein FLJ32926 | 17.3 | 3.94×10−5 |
| 204470_at | CXCL1 | Chemokine (C-X-C motif) ligand 1 | 16.3 | 2.89×10−5 |
| 222271_at | — | Transcribed locus | 15.6 | 2.20×10−4 |
| 203924_at | GSTA1 | Glutathione S-transferase A1 | 15.6 | 1.26×10−5 |
| 226961_at | LOC222171 | Hypothetical protein LOC222171 | 15.2 | 1.28×10−6 |
| 209118_s_at, 202154_x_at | TUBA3 | Tubulin, alpha 3 | 13.2 | 6.00×10−4 |
| 206262_at | ADH1C | Alcohol dehydrogenase 1C, gamma polypeptide | 12.1 | 3.51×10−5 |
| 201884_at | CEACAM5 | Carcinoembryonic antigen-related cell adhesion molecule 5 | 11.6 | 3.82×10−4 |
| 202458_at | PRSS23 | Protease, serine, 23 | 11.2 | 2.91×10−6 |
| BU677128_x_at | ALOX15 | Arachidonate 15-lipoxygenase | 11.0 | 5.57×10−8 |
| 209720_s_at | SERPINB3 | Serine (or cysteine) proteinase inhibitor, clade B, member 3 | 10.6 | 1.32×10−8 |
| 230093_at | TSGA2 | Testis specific A2 homolog (mouse) | 10.3 | 3.80×10−4 |
| 201005_at | CD9 | CD9 antigen (p24) | 10.0 | 3.33×10−5 |
| 208680_at | PRDX1 | Peroxiredoxin 1 | 9.9 | 2.85×10−4 |
| 200824_at | GSTP1 | Glutathione S-transferase pi | 8.8 | 1.39×10−4 |
| 204798_at | MYB | v-myb myeloblastosis viral oncogene homolog (avian) | 8.8 | 5.25×10−5 |
| 219014_at | PLAC8 | Placenta-specific 8 | 8.7 | 1.87×10−7 |
| 200878_at | EPAS1 | Endothelial PAS domain protein 1 | 8.5 | 2.83×10−5 |
| 201650_at | KRT19 | Keratin 19 | 8.0 | 3.53×10−4 |
| CB853184_s_at | MUC16 | Mucin 16, cell surface associated | 7.7 | 8.51×10−4 |
| 200703_at | DNCL1 | Dynein, cytoplasmic, light polypeptide 1 | 7.6 | 4.17×10−4 |
| 212224_at | ALDH1A1 | Aldehyde dehydrogenase 1 family, member A1 | 7.4 | 3.28×10−4 |
| 208659_at | CLIC1 | Chloride intracellular channel 1 | 7.3 | 1.54×10−4 |
| CA944500_at | TNFRSF21 | Tumor necrosis factor receptor superfamily, member 21 | 7.2 | 1.47×10−4 |
| 201201_at | CSTB | Cystatin B (stefin B) | 7.2 | 9.73×10−5 |
| 210096_at | CYP4B1 | Cytochrome P450, family 4, subfamily B, polypeptide 1 | 7.1 | 7.01×10−7 |
| 201468_s_at | NQO1 | NAD(P)H dehydrogenase, quinone 1 | 6.9 | 7.47×10−4 |
| 226021_at | RDH10 | Retinol dehydrogenase 10 (all-trans) | 6.8 | 7.22×10−5 |
| 201012_at | ANXA1 | Annexin A1 | 6.7 | 9.76×10−6 |
| 225325_at | FLJ20160 | FLJ20160 protein | 6.6 | 1.76×10−4 |
| CB528441_at | TSC22D1 | TSC22 domain family, member 1 | 6.6 | 8.80×10−4 |
| 219795_at | SLC6A14 | Solute carrier family 6 (amino acid transporter), member 14 | 6.2 | 4.45×10−5 |
| 201820_at | KRT5 | Keratin 5 | 6.2 | 1.12×10−4 |
| 201563_at | SORD | Sorbitol dehydrogenase | 6.0 | 2.02×10−5 |
| 210021_s_at | UNG2 | Uracil-DNA glycosylase 2 | 6.0 | 3.64×10−6 |
| 221484_at | B4GALT5 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 | 6.0 | 2.79×10−4 |
| 209114_at | TSPAN1 | Tetraspanin 1 | 5.9 | 3.09×10−5 |
| 200627_at | PTGES3 | Prostaglandin E synthase 3 (cytosolic) | 5.8 | 9.26×10−4 |
| 211657_at | CEACAM6 | Carcinoembryonic antigen-related cell adhesion molecule 6 | 5.7 | 8.42×10−5 |
| 232968_at | FANK1 | Fibronectin type III and ankyrin repeat domains 1 | 5.6 | 9.36×10−4 |
| 210272_at | CYP2B7P1 | Cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1 | 5.6 | 1.29×10−6 |
| CA310634_s_at, 209186_at | ATP2A2 | ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 | 5.6 | 5.79×10−5 |
| 223000_s_at | F11R | F11 receptor | 5.6 | 6.38×10−4 |
| 201425_at | ALDH2 | Aldehyde dehydrogenase 2 family (mitochondrial) | 5.5 | 7.77×10−7 |
| 225060_at | LRP11 | Low-density lipoprotein receptor–related protein 11 | 5.4 | 3.81×10−4 |
| 221215_s_at | RIPK4 | Receptor-interacting serine-threonine kinase 4 | 5.4 | 1.05×10−5 |
| 216609_at | TXN | Thioredoxin | 5.2 | 9.57×10−5 |
| 200614_at | CLTC | Clathrin, heavy polypeptide (Hc) | 5.2 | 6.70×10−4 |
| 200642_at | SOD1 | Superoxide dismutase 1, soluble | 5.2 | 9.78×10−4 |
| 1562921_at | EP300 | E1A binding protein p300 | 5.1 | 4.12×10−4 |
| BU727905_s_at | COX6A1 | Cytochrome c oxidase subunit VIa polypeptide 1 | 5.1 | 5.42×10−4 |
| 228969_at | AGR2 | Anterior gradient 2 homolog (Xenopus laevis) | 5.1 | 9.35×10−7 |
| 201266_at | TXNRD1 | Thioredoxin reductase 1 | 5.1 | 4.15×10−4 |
| 224650_at | MAL2 | Mal, T-cell differentiation protein 2 | 5.0 | 3.04×10−5 |
| BM975341_s_at | CTNNA1 | Catenin (cadherin-associated protein), alpha 1 | 4.9 | 1.96×10−4 |
| 204734_at | KRT15 | Keratin 15 | 4.8 | 3.91×10−4 |
| 201030_x_at | LDHB | Lactate dehydrogenase B | 4.8 | 5.88×10−4 |
| 200972_at | TSPAN3 | Tetraspanin 3 | 4.7 | 2.61×10−4 |
| 204363_at | F3 | Coagulation factor III (thromboplastin) | 4.7 | 5.04×10−6 |
| 209154_at | TAX1BP3 | Tax1 binding protein 3 | 4.7 | 4.99×10−4 |
| 202581_at | HSPA1B | Heat shock 70-kD protein 1B | 4.7 | 2.06×10−4 |
| 219799_s_at | DHRS9 | Dehydrogenase/reductase (SDR family) member 9 | 4.6 | 1.10×10−4 |
| BM989324_at | IK | IK cytokine, down-regulator of HLA II | 4.6 | 8.36×10−4 |
| CA450425_x_at | AKR1C3 | Aldo-keto reductase family 1, member C3 | 4.6 | 5.79×10−4 |
| CB529214_at | HNRPC | Heterogeneous nuclear ribonucleoprotein C (C1/C2) | 4.5 | 7.55×10−4 |
| BU683199_s_at | DHCR24 | 24-dehydrocholesterol reductase | 4.5 | 4.65×10−5 |
| 212876_at | B4GALT4 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 | 4.4 | 2.12×10−5 |
| 201951_at | ALCAM | Activated leukocyte cell adhesion molecule | 4.4 | 1.47×10−4 |
| CA450425_at | AKR1C2 | Aldo-keto reductase family 1, member C2 | 4.4 | 9.14×10−4 |
| 1555961_a_at | HINT1 | Histidine triad nucleotide binding protein 1 | 4.3 | 1.71×10−4 |
| 201487_at | CTSC | Cathepsin C | 4.3 | 2.52×10−4 |
| 202804_at | ABCC1 | ATP-binding cassette, sub-family C, member 1 | 4.3 | 1.79×10−4 |
| 224707_at | ORF1-FL49 | Putative nuclear protein ORF1-FL49 | 4.3 | 4.78×10−4 |
| 209211_at | KLF5 | Kruppel-like factor 5 (intestinal) | 4.2 | 2.94×10−4 |
| 217728_at | S100A6 | S100 calcium binding protein A6 (calcyclin) | 4.2 | 7.65×10−5 |
| 217528_at | CLCA2 | Chloride channel, calcium activated, family member 2 | 4.1 | 9.17×10−4 |
| 202071_at | SDC4 | Syndecan 4 (amphiglycan, ryudocan) | 4.1 | 8.41×10−5 |