Table 2.
Common set of Arabidopsis genes with significant changes in expression levels (cutoff 1.5 fold change) in response to treatment with PI4P and with PI5P
| Probe Set ID | Fold Change | Gene Title | AGI | Cellular Component | |
|---|---|---|---|---|---|
| PI5P/wt | PI4P/wt | (Gene Ontology ID) | |||
| Downregulated by both PI5P and PI4P | |||||
| 248448_at | −5.17 | −1.71 | AP2 domain-containing transcription factor, putative | AT5G51190 | |
| 249754_at | −2.36 | −1.92 | oxidoreductase, 2OG-Fe(II) oxygenase family protein | AT5G24530 | |
| 253915_at | −3.14 | −1.72 | calcium-binding EF hand family protein | AT4G27280 | chloroplast (9507) |
| 254231_at | −2.20 | −1.95 | WRKY family transcription factor | AT4G23810 | |
| 254767_s_at | −1.76 | −1.68 | cytochrome P450 71A19, putative (CYP71A19) | AT4G13290 | endomembrane system (12505) |
| 254926_at | −2.02 | −1.78 | 1-aminocyclopropane-1-carboxylate synthase 6/ACC synthase 6 (ACS6) | AT4G11280 | |
| 251400_at | −2.07 | −3 | expressed protein | AT3G60420 | |
| 251705_at | −2.74 | −3.08 | WRKY family transcription factor | AT3G56400 | |
| 252193_at | −1.81 | −1.44 | myb family transcription factor | AT3G50060 | nucleus (5634) |
| 256245_at | −1.73 | −1.68 | heat shock protein 70, putative / HSP70, putative | AT3G12580 | |
| 263539_at | −2.79 | −1.89 | aminotransferase, putative | AT2G24850 | |
| 266385_at | −3.38 | −2.03 | pathogenesis-related protein 1 (PR-1) | AT2G14610 | eXTHacellular (5576), endomembrane system (12505) |
| 265837_at | −3.84 | −1.59 | expressed protein | AT2G14560 | |
| 263852_at | −2.53 | −2.31 | MutT/nudix family protein | AT2G04450 | |
| 261892_at | −2.25 | −1.55 | WRKY family transcription factor | AT1G80840 | |
| 245734_at | −1.60 | −1.69 | hydrolase, alpha/beta fold family protein | AT1G73480 | cytoplasm (5737), chloroplast (9507) |
| 264400_at | −2.33 | −2.07 | glucose-6-phosphate/phosphate translocator, putative | AT1G61800 | chloroplast (9507), membrane (16020), integral to membrane (16021) |
| 259561_at | −2.22 | −1.58 | wall-associated kinase 1 (WAK1) | AT1G21250 | eXTHacellular matrix (5578), plasma membrane (5886 |
| Upregulated by both PI5P and PI4P | |||||
| 264433_at | 1.77 | 2.35 | glycosyl hydrolase family 1 protein | AT1G61810 | endomembrane system (12505 |
| Downregulated by PI4P and upregulated by PI5P | |||||
| 247406_at | −1.74 | 1.86 | two-component responsive regulator/response regulator 6 (ARR6) xyloglucan:xyloglucosyl transferase/xyloglucan endotransglycosylase/ | AT5G62920 | |
| 247925_at | −1.51 | 2.18 | endo-xyloglucan transferase (TCH4) xyloglucan:xyloglucosyl transferase/xyloglucan endo- | AT5G57560 | cell wall (5618) |
| 247866_at | −1.80 | 3.56 | xyloglucan transferase (XTH3 | AT5G57550 | endomembrane system (12505) membrane (16020), integral to membrane |
| 249955_at | −2.02 | 1.53 | sugar transporter, putative | AT5G18840 | membrane (16021) endomembrane |
| 253667_at | −1.79 | 1.59 | peroxidase, putative two-component responsive regulator/response regulator 5 (ARR5)/ response reactor 2 | AT4G30170 | system (12505) |
| 252374_at | −1.50 | 2.32 | (RR2) | AT3G48100 | |
| 259879_at | −2.25 | 2.11 | calcium-binding EF hand family protein | AT1G76650 | chloroplast (9507) endomembrane |
| 245757_at | −1.85 | 4.5 | phosphate-responsive protein, putative | AT1G35140 | system (12505) |
| 266316_at | −2.65 | 1.92 | |||
| Upregulated by PI4P and downregulated by PI5P | |||||
| 248344_at | 1.71 | −2.37 | protein transport protein-related COP1-interactive protein 1/ | AT5G52280 | mitochondrion (5739) |
| 249271_at | 1.53 | −2.45 | CIP1 | AT5G41790 | cytoskeleton (5856) |
| XH/XS domain-containing | |||||
| 255566_s_at | 1.76 | −1.61 | protein | AT4G01780 | |
| 256746_at | 1.50 | −1.28 | glucan phosphorylase, putative | AT3G29320 | chloroplast (9507) |
| 258017_at | 1.79 | −1.84 | expressed protein | AT3G19370 | chloroplast (9507) |
| 258333_at | 1.55 | −2.01 | matrix-localized MAR DNA-binding protein-related | AT3G16000 | thylakoid membrane (9535), plastid nucleoid (42646) |
| 263296_at | 1.70 | −1.81 | calmodulin-binding protein-related | AT2G38800 | |
| 265464_at | 1.60 | −1.6 | myosin heavy chain-related | AT2G37080 | chloroplast (9507) |
| 259794_at | 1.58 | −1.87 | myosin heavy chain-related | AT1G64330 | |
| 261844_at | 1.55 | −2.12 | expressed protein | AT1G15940 | |
| 263112_at | 2.11 | −2.81 | kinase interacting family protein | AT1G03080 | |