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. 2009 Feb 10;3(2):e377. doi: 10.1371/journal.pntd.0000377

Table 1. GenBank accession numbers, and primer sequences and positions used for gene specific dsRNA production and real-time RT-PCR (qRT-PCR) with the resulting fragment size.

Gene target Accession number Primer name Position Primers (5′-3′) Gene specific primer product
dsRNA production
Bm-cpl-1 AF331035 Bm-cpl-1F 548 CCAAGTTCAGTTGATTGG 642 bp
Bm-cpl-1R 1189 GATGGGAAATGAACCCATCG
Bm-cpl-5 AY533167 Bm-cpl-5F 550 CTGCCAGATCAAGTTGAC 648 bp
Bm-cpl-5R 1197 CGGGAAATGAAGCCATAG
Bm-cpl Pro AY533167 Bm-cpl Pro F 117 CAATATGACGAGACTTGCGT 334 bp
Bm-cpl Pro R 450 GACCATAAATTCTTCATCGG
Bm-cpz AY533170 Bm-cpz F 200 CGAAGACTTACCTATAGC 289 bp
Bm-cpz R 488 TTTCGTGTGGTATGCCAAC
Ov-cpz-int2 AY591516 Int2 F 621 TTCCTTTTCGGAGAATTAGC 512 bp
Int2 R 1132 TATGGAAAAAGATCGAAATT
qRT-PCR
Bm-tub-1 AY705382 Bm-tubF 173 AATATGTGCCACGAGCAGTC 307 bp
Bm-tubR 479 GGATACTCCTCACGAATTT
Bm-cpl AY533167 Bm-cpl RTF 100 GACAAAGATTACAAACAGGGC 381 bp
Bm-cpl RTR 480 TGATTGGGCAGTCGAAGTC