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. 2009 Feb 10;4(2):e4422. doi: 10.1371/journal.pone.0004422

Figure 7. Unrooted neighbour-joining phylogenetic tree from the alignment of the D. radiodurans R1 IrrE protein with related proteins.

Figure 7

Bootstrap values based on 1000 replications are listed as percentages at branching point. Bar, 0.1 substitutions per position. The sequence abbreviations, species and functional descriptions are as follows: Q9RXY7_DEIRA, Deinococcus radiodurans R1, IrrE; Q1J1D6_DEIGD, Deinococcus geothermalis DSM 11300, Zn dependent hydrolase fused to HTH domain, IrrE ortholog; Q5FN54_GLUOX, Gluconobacter oxydans, Transcriptional regulator; Q9PG06_XYLFA, Xylella fastidiosa, Putative uncharacterized protein; Q0BRY3_GRABC, Granulibacter bethesdensis ATCC BAA-1260, Putative uncharacterized protein; A1VX22_POLNA, Polaromonas naphthalenivorans CJ2, Putative uncharacterized protein; A7ICR4_XANP2, Xanthobacter autotrophicus ATCC BAA-1158, Putative uncharacterized protein; Q2JEM6_FRASC, Frankia sp. CcI3, Putative uncharacterized protein; A1SCL2_NOCSJ, Nocardioides sp. BAA-499, Helix-turn-helix domain protein; A8TP85_9PROT, Alpha proteobacterium BAL199, Putative uncharacterized protein; A1WNR3_VEREI, Verminephrobacter eiseniae EF01-2, Putative uncharacterized protein; Q1WR57_LACS1, Lactobacillus salivarius subsp. salivarius UCC118, Transcriptional regulator; Q2RX32_RHORT, Rhodospirillum rubrum ATCC 11170, Putative uncharacterized protein; A3WXJ2_9BRAD, Nitrobacter sp. Nb-311A, Putative uncharacterized protein; Q4JWE6_CORJK, Corynebacterium jeikeium K411, Putative uncharacterized protein; Q21PB1_SACD2, Saccharophagus degradans ATCC 43961, Putative uncharacterized protein; Q7TYE6_MYCBO, Mycobacterium bovis, Putative uncharacterized protein Mb2544c; A1QUE7_MYCTF, Mycobacterium tuberculosis F11, Putative uncharacterized protein; A8LBI0_9ACTO, Frankia sp. EAN1pec, Putative uncharacterized protein.