Table 2.
SNP2 tested in CHS
| Gene Symbol | dbSNP ID | Description |
|---|---|---|
| ABCG2 | rs2231137 | ATP-binding cassette, sub-family G (WHITE), member 2 |
| ADAMTS1 | rs428785 | ADAM metallopeptidase with thrombospondin type 1 motif, 1 |
| ADAMTS1 | rs402007 | ADAM metallopeptidase with thrombospondin type 1 motif, 1 |
| ALOX12B | rs3027309 | arachidonate 12-lipoxygenase, 12R type |
| AP3B1 | rs6453373 | adaptor-related protein complex 3, beta 1 subunit |
| AQP10 | rs6685323 | aquaporin 10 |
| BAT2 | rs11538264 | HLA-B associated transcript 2 |
| CALM1 | rs3814843 | calmodulin 1 (phosphorylase kinase, delta) |
| COG2 | rs1051038 | component of oligomeric golgi complex 2 |
| CYBRD1 | rs10455 | cytochrome b reductase 1 |
| CYP17A1 | rs2486758 | cytochrome P450, family 17, subfamily A, polypeptide 1 |
| CYP2C8 | rs10509681 | cytochrome P450, family 2, subfamily C, polypeptide 8 |
| DCC | rs1675225 | deleted in colorectal carcinoma |
| EDG1 | rs2038366 | endothelial differentiation, sphingolipid G-protein-coupled receptor, 1 |
| EIF2AK2 | rs2307469 | eukaryotic translation initiation factor 2-alpha kinase 2 |
| F13A1 | rs5985 | coagulation factor XIII, A1 polypeptide |
| FABP2 | rs1799883 | fatty acid binding protein 2, intestinal |
| FCAR | rs11666735 | Fc fragment of IgA, receptor for |
| FCRLM2 | rs34868416 | Fc receptor-like and mucin-like 2 isoform a |
| FSTL4 | rs3749817 | follistatin-like 4 |
| FSTL4 | rs13183672 | follistatin-like 4 |
| GJA4 | rs1764391 | gap junction protein, alpha 4, 37kDa |
| GRM8 | rs3808117 | glutamate receptor, metabotropic 8 |
| HPS1 | rs2296436 | Hermansky-Pudlak syndrome 1 |
| HPS1 | rs1804689 | Hermansky-Pudlak syndrome 1 |
| IL1F10 | rs6761276 | interleukin 1 family, member 10 (theta) |
| IL1F5 | rs2515401 | interleukin 1 family, member 5 (delta) |
| ITGAE | rs220479 | integrin, alpha E (antigen CD103) |
| K6IRS4 | rs592720 | keratin 74 |
| KIAA1414 | chr2:37081301 | hypothetical protein LOC54497 |
| KIF6 | rs20455 | kinesin family member 6 |
| KRT5 | rs89962 | keratin 5 |
| LGALS14 | rs35541195 | lectin, galactoside-binding, soluble, 14 |
| LOC391102 | rs943133 | similar to 60S acidic ribosomal protein P0 (L10E) |
| LOC651870 | rs3130210 | similar to HLA class II histocompatibility antigen |
| LOC651870 | rs3129196 | similar to HLA class II histocompatibility antigen |
| LPA | rs3798220 | lipoprotein, Lp(a) |
| LY6G5B | rs11758242 | lymphocyte antigen 6 complex, locus G5B |
| MCM10 | rs7905784 | minichromosome maintenance complex component 10 |
| MKI67 | rs10082504 | antigen identified by monoclonal antibody Ki-67 |
| MKI67 | rs11016076 | antigen identified by monoclonal antibody Ki-67 |
| MLF1 | rs4875 | myeloid leukemia factor 1 |
| MYH15 | rs3900940 | myosin, heavy chain 15 |
| MYOM3 | rs12145360 | myomesin family, member 3 |
| None | rs2477037 | |
| None | rs2213948 | |
| OR13G1 | rs1151640 | olfactory receptor, family 13, subfamily G, member 1 |
| OR2A25 | rs2961135 | olfactory receptor, family 2, subfamily A, member 25 |
| P2RXL1 | rs2277838 | purinergic receptor P2X-like 1, orphan receptor |
| PALLD | rs12510359 | palladin, cytoskeletal associated protein |
| PALLD | rs7439293 | palladin, cytoskeletal associated protein |
| PGLYRP2 | rs3813135 | peptidoglycan recognition protein 2 |
| PGLYRP2 | rs892145 | peptidoglycan recognition protein 2 |
| PON1 | rs662 | paraoxonase 1 |
| PRKG1 | rs211070 | protein kinase, cGMP-dependent, type I |
| DMXL2 | rs12102203 | Dmx-like 2 |
| ROS1 | rs619203 | v-ros UR2 sarcoma virus oncogene homolog 1 (avian) |
| ROS1 | rs529038 | v-ros UR2 sarcoma virus oncogene homolog 1 (avian) |
| SERPINA9 | rs17090921 | serpin peptidase inhibitor, clade A (antitrypsin), member 9 |
| SERPINB8 | rs1944270 | serpin peptidase inhibitor, clade B (ovalbumin), member 8 |
| SGIP1 | rs1325268 | SH3-domain GRB2-like (endophilin) interacting protein 1 |
| SLC26A8 | rs2295852 | solute carrier family 26, member 8 |
| SLC39A7 | rs35690712 | solute carrier family 39 (zinc transporter), member 7 |
| SNX19 | rs2298566 | sorting nexin 19 |
| STRN | rs11685600 | striatin, calmodulin binding protein |
| TAF3 | rs4747647 | TAF3 RNA polymerase II |
| TAS2R50 | rs1376251 | taste receptor, type 2, member 50 |
| TMPRSS11B | rs12331141 | transmembrane protease, serine 11B |
| TOX | rs2290526 | thymocyte selection-associated high mobility group box |
| VAMP8 | rs1010 | vesicle-associated membrane protein 8 (endobrevin) |
| VTI1A | rs11814680 | vesicle transport through interaction with t-SNAREs homolog 1A |
| WDR31 | rs10817479 | WD repeat domain 31 |
| WDR55 | rs2286394 | WD repeat domain 55 |
| ZNF132 | rs1122955 | zinc finger protein 132 |