Table 3.
SNPs nominally associated (P<0.05) with incident MI in the white participants of CHS.
| Adjusted for age and sex | Fully adjusted* | ||||||
|---|---|---|---|---|---|---|---|
| Gene (SNP) | Prespecifed Model |
HR (90% CI) | P | FDR† | FPRP‡ (range) | HR (90% CI) | P |
| KIF6 (rs20455) | Dom | 1.29 (1.1–1.52) | 0.004 | 0.20 | 0.0005 (0.0005–0.08) | 1.29 (1.1–1.52) | 0.005 |
| PGLYRP2 (rs3813135) | Dom | 1.28 (1.09–1.5) | 0.006 | 0.20 | 0.28 (0.03–0.80) | 1.28 (1.09–1.51) | 0.006 |
| PGLYRP2 (rs892145) | Dom | 1.27 (1.09–1.49) | 0.006 | NA§ | 0.27 (0.03–0.80) | 1.27 (1.08–1.49) | 0.007 |
| LPA (rs3798220) | Add | 1.62 (1.09–2.42) | 0.022 | 0.40 | 0.01 (0.01–0.66) | 1.46 (0.96–2.24) | 0.069 |
| MCM10 (rs7905784) | Add | 1.19 (1.02–1.37) | 0.028 | 0.40 | 0.92 (0.53–0.99) | 1.16 (1–1.35) | 0.048 |
| VAMP8 (rs1010) | Dom | 1.2 (1.02–1.41) | 0.032 | 0.40 | 0.005 (0.002–0.31) | 1.21 (1.03–1.42) | 0.029 |
| DCC (rs1675225) | Add | 1.22 (1.02–1.45) | 0.036 | 0.40 | 0.95 (0.64–0.99) | 1.24 (1.03–1.48) | 0.026 |
| TAS2R50 (rs1376251) | Add | 1.13 (1–1.27) | 0.046 | 0.43 | 0.005 (0.003–0.33) | 1.14 (1.01–1.28) | 0.038 |
Hazard ratios and P values were calculated using an additive inheritance model unless indicated otherwise. 1-sided P values for the HR using the prespecified risk allele.
Adjusted for baseline age (continuous), sex, BMI (continuous), current smoking, diabetes or impaired fasting glucose, hypertension, LDL cholesterol (continuous), and HDL cholesterol (continuous).
False discovery rate
False positive report probability
For pairs of SNPs in the same gene, false discovery rate was calculated for the SNP with the higher (less significant) P value.