Table 1.
Nucleoside |
kcat (s−1) values |
|||||
---|---|---|---|---|---|---|
WT | S74E | Ratio S74E/WT | S74D | S74Q | S74A | |
(a) Catalytic activities of wild-type dCK and dCK phosphorylation site Ser-74 dCK mutants | ||||||
dC | 0.04 ± 0.005 | 0.45 ± 0.03 | 11.25 | 0.16 ± 0.003 | 0.04 ± 0.03 | 0.04 ± 0.003 |
dA | 0.77 ± 0.07 | 0.69 ± 0.04 | 0.90 | 1.00 ± 0.07 | 0.90 ± 0.08 | 1.12 ± 0.10 |
dG | 0.73 ± 0.05 | 0.36 ± 0.01 | 0.49 | 0.57 ± 0.05 | 0.65 ± 0.03 | 0.68 ± 0.04 |
dFdC | 0.44 ± 0.03 | 1.21 ± 0.05 | 2.75 | 0.90 ± 0.02 | 0.45 ± 0.06 | 0.50 ± 0.03 |
AraC | 0.32 ± 0.02 | 1.06 ± 0.04 | 3.31 | 0.57 ± 0.02 | 0.30 ± 0.08 | 0.33 ± 0.05 |
KM (μM) |
kcat/KM (M−1 s−1) |
|||
---|---|---|---|---|
WT | S74E | WT | S74E | |
(b) Steady-state kinetic parameters KM and kcat/KM of dCK WT and dCK(S74E) | ||||
dC | 1.7 ± 0.2 | 8.9 ± 0.3 | 23.1 × 103 | 50.6 × 103 |
dA | 116.9 ± 11.5 | 517.9 ± 92.7 | 6.6 × 103 | 1.3 × 103 |
dG | 245.8 ± 18.8 | 601.8 ± 80.2 | 2.9 × 103 | 0.6 × 103 |
dFdC | 6.2 ± 1.3 | 15.0 ± 3.1 | 71.0 × 103 | 80.7 × 103 |
AraC | 5.9 ± 1.5 | 24.1 ± 12.1 | 54.2 × 103 | 44.0 × 103 |
All kinetic measurements were performed at 25 °C with 2 mM ATP as the phosphoryl donor and, as indicated, with different nucleoside substrates.
Calculated kcat values include standard error (n = 4).
KM values were determined with constant 2 mM ATP and varying concentrations of substrates. All measurements were performed at 25 °C. The KM values are an average of at least three experiments and were calculated using Origin (Hyperbolic function). The kcat values from Table 1a were used to calculate the kcat/KM values presented here.