Figure 10. The structure of Anguilla anguilla agglutinin protein (PDB entry 1K12).

The binding sites predicted by Ligsite ^CSC are colored in green and the binding sites predicted by the pattern-based method are colored in blue. The protein surface is rendered in gray and the ligand is in the stick form. The Ligsite^CSC predictions are over 10Å away from any atom of the ligand, while one of pattern-based predictions is 0.67Å away from one of the ligand's atoms. Only 4 predictions by Ligsite ^CSC and by the pattern-based method are visible; the remaining predictions are on the other side of the protein.