Table 2.
Experimental TcRBP3-associated RNAs.
| Description | Transcript Name | Systematic name or GenBank Acc. Num. |
| mRNAs | ||
| Ubiquitin/Ribosomal protein S27a | RPS27 | Tc00.1047053510409.39 |
| Polypyrimidine-tract binding protein | PTB | Tc00.1047053511727.160 |
| Ribosomal protein S2 | RPS2 | Tc00.1047053506213.60 |
| Ribosomal protein P2 | RPP2 | Tc00.1047053510267.20 |
| Ribosomal protein L5 | RPL18 | Tc00.1047053509671.80 |
| Ribosomal protein S5 | RPS5 | Tc00.1047053506297.150 |
| Ribosomal protein L22 | RPL22 | Tc00.1047053509747.20 |
| Ribosomal protein L9* | RPL6 | Tc00.1047053509695.170 |
| Ribosomal protein L14* | RPL14 | Tc00.1047053506861.30 |
| Ribosomal protein S6* | RPS6 | Tc00.1047053506241.170 |
| Ribosomal protein L2* | RPL2 | Tc00.1047053511181.100 |
| Ribosomal protein S12* | RPS12 | Tc00.1047053508231.20 |
| Ribosomal protein L27a (L29)* | RPL27 | Tc00.1047053508461.510 |
| RNA helicase | HELI | Tc00.1047053511139.40 |
| RHS family | RHS | Tc00.1047053508325.60 |
| Sterol 24 C-methyltransferase | CMT | Tc00.1047053505683.10 |
| Imidazolonepropionase | IPROP | Tc00.1047053508741.140 |
| Flagellum-adhesion glycoprotein | FAP | Tc00.1047053503571.10 |
| Simil S-adenosylmethionine decarboxylase | SAM | Tc00.1047053504257.30 |
| Calpain-like cysteine peptidase | CALP | Tc00.1047053509001.40 |
| Hypothetical protein 1 | HYPO1 | Tc00.1047053506811.120 |
| Hypothetical protein 11 | HYPO11 | Tc00.1047053506949.30 |
| Hypothetical protein 12 | HYPO12 | Tc00.1047053503999.80 |
| Expressed sequence tag (EST) | ||
| TENU 0711* | EST7 | AI026499 |
| Ribosomal RNA | ||
| 28S ribosomal RNA* | 28S rRNA | L22334 |
| Mitochondrial transcripts | ||
| ATPase subunit 6* | ATPase 6 | U43567 |
| NADH dehydrogenase subunit 8 (TEUF0103)* | ND8 | DQ343645 |
| NADH dehydrogenase subunit 8 (TEUF0239)* | ND8 | DQ343645 |
List of transcripts found in association with immunoprecipitated TcRBP3. Excluding rRNAs and mitochondrial transcripts, the total number of clones analyzed was 25, including 24 sequences matching to CDSs and 1 to EST. RPS2 was isolated twice and the remaining sequences sequenced once. *, not included in the dataset used for motif search.