Table 3.
Comparison of substitution frequencies of SNPs deposited in dbSNP [4] and polymorphisms identified in shotgun sequences.
| Shotgun sequence analysis | ||||||
| dbSNP (genomic) | SNP redundancy = 1 | SNP redundancy = 2 | ||||
| Transitions | 5404 | 73,04% | 64167 | 65,38% | 4676 | 73,36% |
| Transversions | 1995 | 26,96% | 33984 | 34,62% | 1698 | 26,64% |
| Total | 7399 | 98151 | 6374 | |||