Skip to main content
. 2009 Feb 16;4(2):e4488. doi: 10.1371/journal.pone.0004488

Table 3. Concordance of degree of methylation of 5′CGI(s) in UCWBC samples and gene expression levels in FPT samples.

Gene Name tau* Confidence Interval p-value
ACSL3 −0.45 [−0.76, −0.15] <0.01
RAD21 −0.30 [−0.70, +0.09] 0.13
DUSP22 −0.31 [−0.66, +0.05] 0.09
SCD5 −0.11 [−0.49, +0.26] 0.55
SFMBT2 −0.23 [−0.57, +0.10] 0.18
WWOX +0.22 [−0.11, +0.55] 0.20

Note: % of methylated cytosine in the CGI(s) (regions mark as BSPCR in Fig 2) was determined by bisulfite sequencing; levels of gene expression was measured as steady state transcript levels in FPT samples matched to UCWBC samples (n = 14) quantified by real time RT-PCR.

*

The Kendall tau coefficient was calculated between % of methylation and gene expression; negative sign indicates inverse relationship. The larger the negative value means greater negative correlation and statistical significance was determined by a 2-tailed test with p<0.05.