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. 2009 Feb 23;4(2):e4554. doi: 10.1371/journal.pone.0004554

Figure 3. Demonstration of the output results of PPI Finder.

Figure 3

Step 1: Our favourite protein name “dysbindin” is searched by selecting “Gene Name”. Step 2: Three results of “dysbindin” are returned. The first row showing “DTNBP1” is the one that unifies the protein name to a unique gene ID. Step 3: By clicking the “DTNBP1” gene, the gene-centred page is shown. The summary of the information of the “DTNBP1” gene is shown on the top. Step 4: The 35 co-occurred genes and their co-occurrence times, PPI database evidences, and gene ontologies are shown at the bottom of the gene-centred page with the co-occurred GO terms highlighted. Step 5: By clicking the hyperlink to “5” in the column of “co-occurrence times” of the fourth co-occurred “SNAPIN” gene, it prompts the co-occurred abstracts and the highlighted words of interaction extraction in the abstracts.