Table 1.

Category A genes that are induced by E₂ in MCF-7 cells and reversed by SP protein knockdown (SP dependent)

	Gene name	Fold inductiona (iNSE/iNSD)	GO biol process
Gene accession numbers
Category A (B0)
BM459591		1·366667	No info about GO biol process
NM_178501		2·447368	No info about GO biol process
NM_005225	E2f1	2·338661	Apoptosis; + multiple GO terms
BF056555		2·294118	No info about GO biol process
AW002058		2·189189	No info about GO biol process
AI654853		2·179487	No info about GO biol process
H23439		2·095238	No info about GO biol process
H93315		2·022222	No info about GO biol process
AW977008		1·97561	No info about GO biol process
NM_003125	Sprr1b	1·826185	Epidermis development
NM_130830	Lrrc15	1·626459	No info about GO biol process
BQ931737		1·549451	No info about GO biol process
NM_012429	Sec14l2	1·477273	Transport; + multiple GO terms
NM_005551	Klk2	1·423529	Proteolysis and peptidolysis
NM_004973	Jarid2	1·32288	Central nervous system development
BG029979		1·465116	No info about GO biol process
Category A (B+)
BF512856		1·84127	No info about GO biol process
NM_001051	Sstr3	1·65625	Cell-cell signaling; + multiple GO terms
NM_003647	Dgke	1·326923	Intracellular signaling cascade; + multiple GO terms
BM714396		1·6	No info about GO biol process
CF147798	P2ry10	4·5	No info about GO biol process
AW028308		4·333333	No info about GO biol process
U91328		4·384615	No info about GO biol process
BC038785		2·914286	No info about GO biol process
AI444574		2·83871	No info about GO biol process
NM_000171	Glra1	2·433333	Ion transport; + multiple GO terms
BG541228		2·382979	No info about GO biol process
BC012108	Ca14	1·806452	No info about GO biol process
AI202342		1·745763	No info about GO biol process
AF130075		1·597015	No info about GO biol process
BC033385		1·604938	No info about GO biol process
NM_144715	Efhb	1·475728	No info about GO biol process
NM_016594	Fkbp11	1·347765	Protein folding
NM_033315	Rasl10b	1·309091	Small GTPase-mediated signal transduction
AW274516	Itpkb	3·607143	GO:0007165
BG498282		3·071429	No info about GO biol process
BU616743		2·761905	No info about GO biol process
Category A (B-)
BG211832		1·842105	No info about GO biol process
BE927766		1·755556	No info about GO biol process
NM_001165	Birc3	1·620818	Anti-apoptosis; + multiple GO terms
NM_005416	Sprr3	1·391586	GO:8544 (epidermis development);+ multiple GO terms
BX095305		1·319797	No info about GO biol process

^aMCF-7 cells transfected with iNS (nonspecific oligonucleotide) and treated with either 10 nM E₂ (iNSE) or DMSO (iNSD).