Table 4.
Membrane Topology Predictions for RnfD
| method | N-terminal/C-terminal locations | no. of TMHs | TMH segments |
|---|---|---|---|
| HMMTOP | in/in | 10 | 25-42 |
| 47-64 | |||
| 77-94 | |||
| 99-116 | |||
| 125-144 | |||
| 214-233 | |||
| 246-265 | |||
| 270-287 | |||
| 300-317 | |||
| 322-339 | |||
| TMPRED | in/out | 7 | 43-64 |
| 88-109 | |||
| 120-143 | |||
| 216-236 | |||
| 243-262 | |||
| 269-285 | |||
| 304-337 | |||
| TMHMM | in/in | 10 | 20-39 |
| 43-65 | |||
| 72-91 | |||
| 95-117 | |||
| 124-146 | |||
| 212-234 | |||
| 241-263 | |||
| 268-287 | |||
| 300-317 | |||
| 322-341 | |||
| MEMSAT | in/in | 8 | 23-29 |
| 47-64 | |||
| 84-108 | |||
| 211-234 | |||
| 243-262 | |||
| 270-286 | |||
| 300-316 | |||
| 323-340 | |||
| TOPPRED | 7 | 37-57 | |
| 89-109 | |||
| 124-144 | |||
| 214-234 | |||
| 242-262 | |||
| 267-287 | |||
| 300-320 | |||
| ConPred II | in/in | 8 | 42-62 |
| 89-109 | |||
| 122-142 | |||
| 217-237 | |||
| 243-263 | |||
| 268-288 | |||
| 299-319 | |||
| 321-341 |