TABLE 1.
Accessible surface area of SERCA transmembrane region
Crystallographic data used for ASA calculations (26, 27) were taken from the following: 2ear (1), 1iwo (3), 1su4 (2), 1vfp (4), and 3ba6 and 3b9b (5). Tg means thapsigargin; AMPPCP means adenosine 5′-(β,γ -methylene)triphosphate.
Crystal structure | Condition | ASA | Relative hydrophobicity | Conformation |
---|---|---|---|---|
Å2 | % | |||
2ear | Tg + EGTA | 8701 | 100 | E2 |
1iwo | Tg + EGTA | 8235 | 94.6 | E2 |
3b9b | BeF4- | 8164 | 93.8 | E2 |
1su4 | Ca2+ | 7114 | 81.7 | E1 |
1vfp | Ca2+ + AMPPCP | 7295 | 83.8 | E1 |
3ba6 | E1PCa | 7350 | 84.5 | E1 |