TABLE 2.
Isobaric glycoforms of sVSG detected by ES-MSa
Measured (and theoretical) mass (Da) of WT/uggt KO/WT + dNJ/uggt KO + dNJb | Proteinc | GlcN-Ino-cPd | EtNPd | HexNAc | Hexose | WT | UGGT KO | WT + dNJ | UGGT KO + dNJ |
---|---|---|---|---|---|---|---|---|---|
—/—/51,533/— (51,531) | 1 | 1 | 1 | 5 | 23 | + | |||
51,494/51,493/51,493/51,499 (51,490) | 1 | 1 | 1 | 4 | 24 | + | + | ++ | + |
51,371/51,370/51,368/— (51,369) | 1 | 1 | 1 | 5 | 22 | + | + | + | |
51,329/51,331/51,329/51,324 (51,328) | 1 | 1 | 1 | 4 | 23 | + | + | +++ | + |
51,208/51,209/51,189/51,223 (51,207) | 1 | 1 | 1 | 5 | 21 | + | + | + | + |
51,168/51,168/51,169/51,155 (51,166) | 1 | 1 | 1 | 4 | 22 | + | + | +++ | + |
51,044/51,044/51,045/51,037 (51,045) | 1 | 1 | 1 | 5 | 20 | ++ | + | + | + |
51,005/51,005/51,006/51,002 (51,004) | 1 | 1 | 1 | 4 | 21 | ++ | ++ | + | +++ |
50,882/50,882/50,882/50,884 (50,883) | 1 | 1 | 1 | 5 | 19 | + | + | + | + |
50,842/50,843/50,843/50,840 (50,842) | 1 | 1 | 1 | 4 | 20 | +++ | +++ | + | +++ |
50,680/50,680/—/50,676 (50,680) | 1 | 1 | 1 | 4 | 19 | ++ | ++ | ++ | |
50,518/50,518/—/50,516 (50,518) | 1 | 1 | 1 | 4 | 18 | + | + | + | |
50,356/50,356/—/50,356 (50,356) | 1 | 1 | 1 | 4 | 17 | + | + | + |
The abundance of each isobaric group of VSG molecules is indicated as follows: +++, mass peaks >70% of the biggest species; ++, mass peaks >40% of the biggest species; +, mass peaks <40% of the biggest species. WT, wild type.
The measured masses (from Fig. 3) for sVSG221 samples from wild-type cells, TbUGGT null mutant cells (UGGT KO), wild-type cells grown with dNJ (WT + dNJ), and TbUGGT null mutant cells grown with dNJ (UGGT KO + dNJ) are tabulated. The theoretical mass of the assigned VSG composition is shown in parentheses. —, not measured.
The average molecular weight of sVSG221 polypeptide (46,284 Da) minus amino acids 1 to 27 (signal peptide) and residues 460 to 476 (GPI attachment signal sequence) with four disulfide bonds (29).
Components of GPI common to all glycoforms of sVSG221: GlcN-Ino-cP, glucosamine-α1-6-myo-inositol-1,2-cyclic phosphate; EtNP, ethanolamine phosphate.