TABLE 3.
MIRU-VNTR analysis of 53 isolates comprising seven clusters with identical IS6110 RFLP patterns
| Lineage and family | ST | Octal code for spoligotyping | No. of IS6110 copies | No. of alleles in the following MIRU-VNTR loci:
|
||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MIRU4 | MIRU26 | MIRU40 | MIRU10 | MIRU16 | MIRU31 | Mtub04 | ETR-C | ETR-A | Mtub30 | Mtub39 | QUB-4156c | QUB-11b | Mtub21 | QUB-26 | ||||
| Beijing | ||||||||||||||||||
| TL68 | ST1 | 000000000003771 | 18 | 3 | 5 | 0.9 | 2 | 2 | 4 | |||||||||
| TL297 | ST1 | 000000000003771 | 18 | 3 | 6 | 2.6 | 1 | 2 | 4 | |||||||||
| TL117 | ST1 | 000000000003771 | 14 | 3 | 6 | 3.4 | 2 | 2 | 4 | |||||||||
| TL237 | ST1 | 000000000003771 | 14 | 3 | 7 | 2.6 | 2 | 2 | 3 | |||||||||
| TL120 | ST1 | 000000000003771 | 14 | 3 | 6 | 3.5 | 2 | 2 | 4 | 3 | 3 | 4 | 4 | 2 | 2 | 8 | 4 | 3 |
| TL194 | ST1 | 000000000003771 | 14 | 3 | 6 | 3.4 | 2 | 2 | 4 | 3 | 3 | 4 | 4 | 2 | 2 | 8 | 4 | 3 |
| TL174 | ST1 | 000000000003771 | 17 | 3 | 6 | 2.6 | 2 | 2 | 3 | 3 | 3 | 4 | 4 | 2 | 2 | 5 | 4 | 7 |
| TL181 | ST1 | 000000000003771 | 17 | 3 | 6 | 2.6 | 2 | 2 | 4 | 3 | 3 | 4 | 4 | 2 | 2 | 5 | 4 | 7 |
| TL261 | ST1 | 000000000003771 | 17 | 3 | 6 | 2.6 | 2 | 2 | 4 | 3 | 3 | 4 | 2 | 2 | 2 | 3 | 4 | 7 |
| TL205 | ST1 | 000000000003771 | 18 | 3 | 6 | 2.6 | 1 | 2 | 4 | 44 | 33 | 4 | 4 | 2 | 2 | 6 | 4 | 6 |
| TL264 | ST1 | 000000000003771 | 18 | 3 | 6 | 2.6 | 1 | 2 | 3 | 44 | 33 | 4 | 4 | 2 | 2 | 6 | 4 | 6 |
| EAI | ||||||||||||||||||
| TL166 | ST292 | 777777757413371 | 8 | 4 | 2 | 1.8 | 3 | 2 | 3 | |||||||||
| TL171 | ST292 | 777777757413371 | 8 | 5 | 2 | 2.6 | 3 | 2 | 4 | |||||||||
| TL45 | Orphan | 077737777413731 | 1 | 7 | 2 | 2.6 | 3 | 2 | 4 | |||||||||
| TL115 | Orphan | 077737777413731 | 1 | 4 | 5 | 1.8 | 1 | 2 | 2 | |||||||||
| TL64 | Orphan | 734177777413771 | 1 | 5 | 2 | 2.6 | 3 | 1 | 4 | 2 | 3 | 3 | 2 | 4 | 1 | 2 | 4 | 6 |
| TL100 | Orphan | 734177777413771 | 1 | 7 | 2 | 2.6 | 2 | 1 | 4 | 2 | 2 | 6 | 2 | 4 | 1 | 2 | 4 | 6 |
| TL267 | Orphan | 734177777413771 | 1 | 5 | 2 | 2.6 | 2 | 1 | 4 | 2 | 2 | 6 | 2 | 4 | 1 | 2 | 4 | 6 |
| TL244 | Orphan | 734177777413771 | 1 | 5 | 2 | 2.6 | 2 | 1 | 3 | 2 | 3 | 6 | 2 | 4 | 1 | 2 | 4 | 5 |
| TL126 | Orphan | 734177777413771 | 1 | 5 | 3 | 2.6 | 2 | 1 | 4 | |||||||||
| TL41 | ST11 | 477777777413071 | 1 | 2 | 2 | 3.4 | 2 | 2 | 4 | 2 | 3 | 6 | 1 | 5 | 1 | 3 | 5 | 6 |
| TL288 | ST11 | 477777777413071 | 1 | 7 | 2 | 3.4 | 3 | 2 | 3 | 2 | 3 | 6 | 1 | 3 | 1 | 3 | 5 | 4 |
| TL230 | ST11 | 477777777413071 | 1 | 5 | 2 | 3.4 | 2 | 2 | 3 | |||||||||
| TL19 | ST113 | 477777776413071 | 1 | 5 | 2 | 3.4 | 3 | 2 | 3 | |||||||||
| TL72 | ST126 | 477777774133771 | 1 | 5 | 2 | 1.8 | 3 | 2 | 4 | 2 | 3 | 6 | 1 | 4 | 1 | 3 | 5 | 6 |
| TL188 | ST126 | 477777774133771 | 1 | 5 | 2 | 1.8 | 3 | 2 | 4 | 2 | 3 | 5 | 1 | 3 | 1 | 3 | 4 | 6 |
| TL348 | ST138 | 477777774133771 | 1 | 6 | 2 | 1.8 | 3 | 2 | 4 | 2 | 3 | 6 | 1 | 4 | 1 | 3 | 5 | 3 |
| TL149 | ST138 | 777777777413700 | 1 | 5 | 2 | 3.4 | 4 | 2 | 4 | |||||||||
| TL219 | ST236 | 777777777413771 | 1 | 4 | 2 | 2.6 | 3 | 2 | 4 | 2 | 3 | 6 | 1 | 3 | 1 | 3 | 3 | 6 |
| TL409 | ST236 | 777777777413771 | 1 | 4 | 2 | 2.6 | 3 | 1 | 4 | 2 | 3 | 6 | 2 | 3 | 1 | 2 | 3 | 6 |
| TL360 | ST256 | 777777777413637 | 1 | 6 | 2 | 2.6 | 1 | 1 | 4 | |||||||||
| TL145 | ST340 | 474377777413771 | 1 | 5 | 2 | 3.4 | 3 | 2 | 5 | 2 | 3 | 6 | 1 | 2 | 1 | 1 | 10 | 6 |
| TL163 | ST340 | 474377777413771 | 1 | 5 | 2 | 2.6 | 2 | 2 | 4 | 2 | 2 | 6 | 1 | 3 | 1 | 3 | 12 | 5 |
| TL183 | ST340 | 474377777413771 | 1 | 4 | 2 | 2.6 | 3 | 2 | 4 | 2 | 3 | 6 | 1 | 3 | 1 | 2 | 9 | 6 |
| TL286 | ST340 | 474377777413771 | 1 | 5 | 2 | 2.6 | 3 | 2 | 4 | |||||||||
| TL217 | ST355 | 477777777413031 | 1 | 5 | 2 | 3.4 | 3 | 2 | 3 | |||||||||
| TL16 | ST493 | 774177777413731 | 1 | 5 | 2 | 2.6 | 1 | 1 | 3 | |||||||||
| TL139 | ST6 | 077777777413731 | 1 | 5 | 2 | 2.6 | 3 | 2 | 4 | 2 | 3 | 8 | 2 | 2 | 1 | 7 | 4 | 5 |
| TL161 | ST6 | 077777777413731 | 1 | 5 | 2 | 2.6 | 3 | 2 | 3 | 2 | 3 | 8 | 2 | 2 | 1 | 7 | 5 | 5 |
| TL247 | ST72 | 777577777003731 | 1 | 6 | 2 | 2.6 | 3 | 2 | 3 | 2 | 2 | 4 | 2 | 4 | 1 | 5 | 8 | 4 |
| TL260 | ST72 | 777577777003731 | 1 | 6 | 2 | 2.6 | 3 | 2 | 4 | 2 | 2 | 7 | 2 | 4 | 1 | 5 | 8 | 4 |
| TL293 | ST72 | 777577777003731 | 1 | 6 | 2 | 2.6 | 3 | 2 | 4 | 2 | 2 | 7 | 2 | 4 | 1 | 5 | 11 | 4 |
| TL294 | ST72 | 777577777003731 | 1 | 6 | 2 | 2.6 | 3 | 2 | 4 | 2 | 2 | 7 | 2 | 4 | 1 | 5 | 11 | 4 |
| TL7 | ST763 | 777700777413700 | 1 | 5 | 2 | 2.6 | 4 | 2 | 4 | |||||||||
| TL186 | ST951 | 774177777413771 | 1 | 5 | 2 | 2.6 | 3 | 1 | 4 | 3 | 3 | 6 | 2 | 5 | 1 | 2 | 4 | 6 |
| TL227 | ST951 | 774177777413771 | 1 | 5 | 2 | 2.6 | 2 | 1 | 4 | 2 | 3 | 6 | 2 | 5 | 1 | 2 | 4 | 3 |
| TL36 | ST951 | 774177777413771 | 1 | 5 | 2 | 3.4 | 3 | 1 | 3 | |||||||||
| TL213 | Orphan | 417777777413071 | 1 | 5 | 2 | 3.4 | 3 | 2 | 4 | |||||||||
| TL77 | Orphan | 474377707413771 | 1 | 5 | 2 | 2.6 | 3 | 2 | 4 | |||||||||
| TL23 | Orphan | 700001777413771 | 1 | 5 | 2 | 3.4 | 3 | 1 | 4 | |||||||||
| TL332 | Orphan | 730177777413631 | 1 | 5 | 2 | 3.4 | 2 | 1 | 4 | |||||||||
| TL197 | Orphan | 773700777413700 | 1 | 5 | 2 | 2.6 | 4 | 2 | 4 | |||||||||
| TL20 | Orphan | 777777777413611 | 1 | 6 | 1 | 2.6 | 4 | 2 | 2 | |||||||||