TABLE 2.

SNP positions informative for the BKV genotype

Gene (positions)	Subtype(s)	No. of SNPs	SNP position(s) (Dunlop numbering)
Agnogene (388-588)	II	1	427
VP2/VP3 (624-1679)	I	17	848, 1067, 1154, 1217, 1274, 1284, 1304, 1316, 1342, 1347, 1361, 1364, 1367, 1400, 1422, 1425, 1514
	II and III	10	734, 781, 815, 1064, 1133, 1172, 1193, 1199, 1223, 1367
	II	1	1409
	III	1	1247
	IV	8	986, 1187, 1322, 1337, 1367, 1389, 1427, 1429
VP1 (1564-2652)	I	14	1760, 1787, 1793, 1848, 1912, 1978, 2073, 2112, 2237, 2325, 2370, 2544, 2550, 2583
	II and III	11	1824, 1858, 1971, 2086, 2112, 2142, 2274, 2370, 2391, 2510, 2550
	III	7	1766, 1767, 1768, 1770, 1857, 2259, 2559
	IV	24	1704, 1769, 1770, 1784, 1854, 1869, 1938, 1965, 2007, 2013, 2034, 2067, 2109, 2112, 2184, 2199, 2235, 2274, 2370, 2406, 2413, 2457, 2541, 2550
LTA (2722-4566, 4911-5153)	I	23	2802, 3025, 3035, 3133, 3229, 3232, 3421, 3430, 3450, 3451, 3478, 3579, 3634, 3868, 3979, 4024, 4069, 4076, 4105, 4153, 4339, 4444, 5139
	II and III	28	2788, 2791, 2802, 2809, 3039, 3079, 3081, 3139, 3250, 3303, 3481, 3501, 3511, 3570, 3577, 3589, 3634, 4090, 4330, 4339, 4483, 5141, 5142
	II	2	3934, 4270
	III	13	2808, 3070, 3124, 3193, 3409, 3772, 3877
	IV	34	2920, 3036, 3058, 3121, 3157, 3195, 3202, 3232, 3265, 3376, 3400, 3469, 3580, 3634, 3757, 3772, 3781, 3829, 3859, 3871, 3916, 3942, 3955, 3985, 4021, 4080, 4081, 4298, 4299, 4339, 4459, 4462, 4944, 5061
Small t antigen	I	2	4836, 4806
(4911-4635 [partial])	II and III	7	4878, 4877, 4830, 4764, 4734, 4704, 4692
	II	1	4726
	IV	1	4797