Table 2a.

Genes / Chromosomal Regions Identified in the Quantitative Trait Analysis With At least 2 Independent SNPs at a 10⁻⁶ Significance Level

Chromosome	Gene	SNP	Location	Type	MAF_CTRL	MAF_SZ	P Value
3	ROBO2-ROBO1	Rs7610746	78138637	Intergenic	0.31	0.41	7.56E-06
3	ROBO2-ROBO1	rs9836484	78127379	Intergenic	0.32	0.41	4.23E-06
3	TNIK	rs2088885	172453985	Intronic	0.47	0.45	6.24E-06
3	TNIK	rs7627954	172462669	Intronic	0.47	0.45	6.24E-06
5	CTXN3-SLC12A2	rs245178	127231091	Intergenic	0.32	0.30	1.22E-06
5	CTXN3-SLC12A2	rs245201	127197111	Intergenic	0.32	0.30	9.31E-08

Note: Quantitative trait analysis for the interaction between right dorsolateral prefrontal cortex and single-nucleotide polymorphisms (SNPs) from the genome-wide association study. All listed genes have at least 2 SNPs in the right DLPFC at ≤10⁻⁶. The chromosome number (in order), gene name (build 36.3), SNP basepair position, physical location, and region are presented. The minor allele frequency (MAF) is presented for healthy controls and schizophrenic patients.