Table 1.
Macrolide | Mutagenized codona | Colonies isolated | Survived 2° selection | Passed PCR screen | Clones sequenced | L4/L22 mutantsb |
---|---|---|---|---|---|---|
Erythromycin | ||||||
L4 | ||||||
Gln62 | 136 | 117 | 98 | 96 | 69 | |
Lys63 | 130 | 121 | 110 | 98 | 96 | |
Gly64 | 159 | 149 | 117 | 96 | 96 | |
Thr65 | 129 | 121 | 89 | 89 | 65 | |
Gly66 | 170 | 167 | 99 | 96 | 56 | |
Arg67 | 246 | 172 | 81 | 81 | 76 | |
Gln62Phe | 33 | 31 | NPc | 31 | 20 | |
Gln62Lys | 33 | 19 | NPc | 19 | 0 | |
Thr65Pro | 31 | 31 | 31 | 24 | 24 | |
Thr65Ser | 46 | 37 | 29 | 24 | 21 | |
L22 | ||||||
Arg88 | 201 | 82 | 49 | 48 | 33 | |
Ala89 | 167 | 117 | 100 | 96 | 45 | |
Lys90 | 98 | 98 | 96 | 96 | 96 | |
Gly91 | 79 | 79 | 12 | 6 | 4 | |
Arg92 | 135 | 94 | 61 | 48 | 30 | |
Ala93 | 81 | 81 | 53 | 53 | 13 | |
Spiramycin | ||||||
L4 | ||||||
Gln62 | 98 | 81 | 68 | 48 | 46 | |
Lys63 | 97 | 93 | 62 | 48 | 48 | |
Gly66 | 49 | 49 | 48 | 48 | 48 | |
Tylosin | ||||||
L22 | ||||||
Lys90 | 97 | 88 | 57 | 48 | 47 |
Individual codons were randomized using oligonucleotide libraries except where specific mutations are indicated.
Indicates that L4 or L22 mutations were identified within and/or adjacent to the target codon. Several erythromycin-resistant isolates contained wild-type L4 and L22, and presumably these cells contain unidentified macrolide-resistance mutations.
3′-mismatch PCR screening was not performed (NP) on mutants from these selections.