Table 5.
Number of elements annotated from each resource in the current prototype
| Resource | Number of elements | Resource local size (Mb) | Number of direct annotations (mgrep results) | Total number of 'useful'1 annotations | Average number of annotating concepts |
|
PubMed (subset) http://www.ncbi.nlm.nih.gov/PubMed/ |
1050000 | 146.1 | 30822190 | 174840027 | 763 |
|
ArrayExpress http://www.ebi.ac.uk/arrayexpress/ |
3371 | 3.6 | 502122 | 1849224 | 525 |
|
ClinicalTrials.gov http://clinicaltrials.gov/ |
50303 | 99 | 16108580 | 48796501 | 824 |
|
Gene Expression Omnibus http://www.ncbi.nlm.nih.gov/geo/ |
2085 | 0.7 | 165539 | 772608 | 359 |
|
ARRS GoldMiner (subset) http://goldminer.arrs.org |
1155 | 0.5 | 134229 | 662687 | 564 |
| TOTAL | 1106914 | 249.9 | 47732660 | 226921047 | (avg)461.5 |
1 We do not add a closure annotation between an element and a concept in the index if the given element was already directly annotated with the given concept.