Table 3. Thermodynamic Parameters of DNA Duplexes.
duplex | Tma (°C) | ΔH° (kcal/mol) | ΔS° (kcal/mol °K)d | ΔG°25 °C (kcal/mol)d | ΔG°37 °C (kcal/mol)d | ΔΔG37 °C (kcal/mol)d |
---|---|---|---|---|---|---|
T6•A19b | 71.6 | −87.3 ± 2 | −0.23 ± 0.01 | −18.1 ± 0.2 | −15.2 ± 0.2 | |
Tg6•A19b | 58.3 | −83.8 ± 1 | −0.23 ± 0.01 | −14.7 ± 0.1 | −11.9 ± 0.1 | 3.3 ± 0.1 |
Tg6•G19 b | 58.3 | −87.5 ± 5 | −0.24 ± 0.02 | −15.0 ± 0.3 | −12.1 ± 0.2 | 3.1 ± 0.2 |
T6•A19 c | 73.4 | −90.7 ± 2 | −0.24 ± 0.02 | −18.8 ± 0.2 | −15.9 ± 0.2 | |
Tg6•A19 c | 60.5 | −81.1 ± 2 | −0.22 ± 0.04 | −14.9 ± 0.4 | −12.2 ± 0.4 | 3.0 ± 0.4 |
Tg6•G19 c | 60.0 | −86.4 ± 1 | −0.24 ± 0.02 | −15.3 ± 0.2 | −12.5 ± 0.2 | 2.7 ± 0.2 |
Calculated for 1.0 × 10−4 M oligodeoxynucleotide duplex concentration.
Reported errors are standard deviations.
Determined from individual melting curves.
Determined from (Tm−1) vs ln(Ct/4) plots.