Table 3.
Summary of T cell-DC contact measurements of published lymph node datasets (Bousso & Robey, 2004), and thymocyte-DC contacts. For the percent of time points in contact with DC, the discordance rate with manual analysis is computed by the absolute difference between automated result and manual measurement Automated results were found to agree with unpublished manual measurements (Ladi et al., 2008).
| Dataset Type | # of Datasets | # of Thymocytes | Time points with DC contact | Total Time Points examined | Percent of time points in contact with DC | Discordance with manual analysis | # of DC contacts | Total time of tracks examined (hours) | Frequency of contacts per hour | Avg. duration of contact (min) |
|---|---|---|---|---|---|---|---|---|---|---|
| T-cell without antigen | 1 | 51 | 124 | 548 | 22.63% | N/A | 28 | 4.57 | 6.13 | 2.36 |
| T-cell with antigen | 1 | 31 | 314 | 437 | 71.85% | N/A | 28 | 3.64 | 10.44 | 5.70 |
| Wild Type | 4 | 402 | 844 | 6270 | 13.46% | 1.46% | 184 | 63.9 | 2.88 | 2.79 |
| (P14 → B6) | 6 | 456 | 1808 | 5354 | 33.77% | 7.73% | 328 | 54.6 | 6.01 | 3.47 |
| P14 → (DBA × B6) | 3 | 219 | 753 | 3037 | 24.79% | 0.49% | 140 | 31.0 | 4.52 | 3.51 |