Table 1.
CpG characteristics of test sequences
Sequence | Length | CpG number | CpG densitya | Closely spaced CpGsb |
---|---|---|---|---|
ICR | 2.4 | 73 | 30.0 | 23 |
CpG-Shift1 | 2.4 | 73 | 30.0 | 10 |
CpG-Shift2 | 2.4 | 73 | 30.0 | 1 |
pBS | 1.1 | 73 | 66.4 | 28 |
Lambda | 2.3 | 66 | 28.7 | 15 |
Igf2 DMR2 | 2.9 | 117 | 40.3 | 34 |
H19 promoter | 0.74 | 28 | 38.0 | 7 |
aNumber of CpGs per 1 kb.
bNumber of CpGs separated by 5 bp or less.