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. 2009 Jan 5;75(5):1395–1401. doi: 10.1128/AEM.02201-08

TABLE 2.

Genetic sequencing of PVs (n = 252), isolated from wastewater samples, by surveillance site and study period

Site No. of isolates for which data are available No. of strains with mutations (%) Among strains with mutation
No. of isolates with intertype recombination (%)
Median no. of mutations per strain (range) No. of strains with ≥5 mutations (%) Median % divergence from Sabin strain (range) Median no. of transversions (range) Median ratio of no. of transversions/total no. of mutations (range) Median no. of silent mutations (range) Median ratio of no. of silent mutations/total no. of mutations (range) Total S1/S2 S1/S3 S2/S1 S2/S3 S3/S1 S3/S2
All sites and periods combined 252 194 (77) 2 (1, 7) 6 (3) 0.22 (0.11, 0.77) 0 (0, 3) 0 (0, 1) 1 (0, 3) 0.50 (0, 1) 50 (20) 2 (4) 1 (2) 3 (6) 4 (8) 10 (20) 30 (60)
Córdoba City
    Initial IPV period (May-10 August 2005) 5 4 (80) 2 (1, 5) 1 (25) 0.22 (0.11, 0.56) 0 (0, 0) 0 (0, 0) 1 (0, 2) 0.35 (0, 1) 1 (20) 0 0 0 0 0 1 (100)
    From first OPV reintroduction (11 August 2005-April 2006) 129 104 (81) 2 (1, 5) 1 (1) 0.22 (0.11, 0.55) 0 (0, 3) 0 (0, 1) 1 (0, 3) 0.50 (0, 1) 26 (20) 2 (8) 0 0 2 (8) 3 (12) 19 (73)
Rio Cuarto 37 30 (81) 2 (1, 7) 2 (7) 0.22 (0.11, 0.77) 0 (0, 2) 0 (0, 1) 1 (0, 3) 0.50 (0, 1) 7 (19) 0 0 1 (14) 0 3 (43) 3 (43)
Villa Maria 39 29 (74) 2 (1, 5) 1 (3) 0.11 (0.11, 0.56) 0 (0, 1) 0 (0, 1) 1 (0, 3) 0.20 (0, 1) 9 (23) 0 0 2 (22) 0 3 (33) 4 (44)
San Francisco 42 27 (64) 2 (1, 7) 1 (4) 0.22 (0.11, 0.77) 0 (0, 1) 0 (0, 1) 1 (0, 3) 0.29 (0, 1) 7 (17) 0 1 (14) 0 2 (29) 1 (14) 3 (43)