TABLE 2.

Imbalances in recombination breakpoint locations between different genome regions

Host	Family	Genus	Data set		P valuea
			Name	No.	Coding vs noncoding regions	Middle 50% vs end 50% of genes	CP genes vs rest of genes
Animals	Unassigned	Anellovirus	TTV	7	<0.0001	0.356	0.0002
			TTMV	8	0.001	0.0082	0.9243
	Circoviridae	Circovirus	PCV	9	1	0.878	0.4463
		Circovirus	Bird circovirus	10 + 11	0.0011	0.0029	0.0013
	Parvoviridae	Parvovirus plus dependovirus	Merged	13 + 15	<0.0001	0.0499	0.977
		Dependovirus	Dependovirus	13	1	0.0988	0.826
		Parvovirus	Parvovirus	15	0.0197	0.2001	0.0932
Bacteria	Microviridae	Microvirus	Microvirus	16	1	0.0104	0.0047
Plants	Geminiviridae	Mastrevirus	African streak virus	17	<0.0001	0.0286	0.0133
		Begomovirus plus curtovirus	DNA-A	18	0.084	<0.0001	0.0172
		Begomovirus	DNA-B	19→23	<0.0001	0.0314
		Satellite DNA	Beta	24→26	0.0001	0.0016
		Satellite DNA	DNA-1	27	0.5669	0.7779
	Nanoviridae	Nanovirus plus babuvirus	CP component	32 + 33	0.4827	0.001

^aValues in bold are significant.