TABLE 2.
The three most common spoligotype patterns in each of four west-central African countries
| Country | Pattern designationa | Spoligotype patternb | Frequency (%) |
|---|---|---|---|
| Chad | SB0944 | 1101111101111110111111111111101111111100000 | 40 |
| SB1025 | 1101111101111110111111111111100011111100000 | 20 | |
| SB0951 | 1101111101111110111111111111101111110100000 | 11 | |
| Cameroon | SB0944 | 1101111101111110111111111111101111111100000 | 63 |
| SB1461 | 1101111100000000011111111111101111111100000 | 11 | |
| SB1460 | 1101111101110000001111111111101111111100000 | 8 | |
| Nigeria | SB0944 | 1101111101111110111111111111101111111100000 | 46 |
| SB1027 | 1101111101111110111111111100101111111100000 | 14 | |
| SB1025 | 1101111101111110111111111111100011111100000 | 4 | |
| Mali | SB0300 | 1101101101111110111111111111101111111100000 | 40 |
| SB0134c | 1100011101111110111111111111111111111100000 | 30 | |
| SB1410 | 1001101101111110111111111111101111111100000 | 10 |
a
International names for these spoligotype patterns were assigned by Mbovis.org (http://www.Mbovis.org).
b
The spoligotype pattern is shown as a series of ones and zeros, with one representing hybridization to the spacer and zero representing the absence of hybridization.
c
Not a member of the Af1 clonal complex.