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. Author manuscript; available in PMC: 2009 Feb 27.
Published in final edited form as: Bioinformatics. 2008 Feb 22;24(7):924–931. doi: 10.1093/bioinformatics/btn069

Table 4.

Contact predictions on the FM targets of CASP7

SVM-LOMETS SVM-SEQ SAM-T06_server
Short N1 15 (7) 15 (7) 7 (7)
Acc 0.180 (0.232) 0.340 (0.436) 0.l84 (0.184)
Pct 0.2 (0.2) 0.2 (0.2) 0.2 (0.2)
Medium N 13 (13) 15 (13) 14 (13)
Acc 0.078 (0.078) 0.233 (0.226) 0.147 (0.152)
Pct 0.2 (0.2) 0.2 (0.2) 0.2 (0.2)
Long N 15 (13) 15 (13) 13 (13)
Acc 0.054 (0.055) 0.202 (0.228) 0.163 (0.163)
Pct 0.2 (0.2) 0.2 (0.2) 0.2 (0.2)
All N 13 (6) 15 (6) 6 (6)
Acc 0.108 (0.158) 0.258 (0.358) 0.212 (0.212)
Pct 0.6 (0.6) 0.6 (0.6) 0.6 (0.6)
1

Number of proteins which have L/5 contact predictions in each sequence separation range. The numbers in parenthesis are those proteins having all three methods with L/5 contact predictions.