Table 1.
Probe name | Target organism | Discriminating probe |
PenCtr (A26) | Penicillium citrinum | GCCTCGGCGGGCCCC |
Pezizomycota (A29) | various Penicillia and other | GTCCGGTCCTCGAGCGTATGG |
NP101 (A45) | Environmental clone from compost | ATCAAAGTGCTGCAGGGCT |
PenCom (A50) | Penicillium commune | CCCCGTCCTCCGATCTCCG |
IssOr (A52) | Issatschenkia orientalis | GCGGACGACGTGTAAAGAGC |
CanEt1 (A53) | Candida ethanolica | ACGCTTGGGGTCTCCGAG |
GalGe (A54) | Galactomyces geotrichum | ACAACACTATTCAACCTCAGATCA |
TherLa (A55) | Thermomyces lanuginosus | CACTGTGAACGCTTTTGTGAA |
CanEt2 (A56) | Candida ethanolica | CACGAGCGAACTAGAACAGG |
GeoEme (A57) | Geosmithia emersonii | AGACCCTCGTGAACGCTGT |
AspFum (A58) | Aspergillus fumigatus | AGACCCCAACATGAACGCTG |
Emesp A(65) | Emericella sp, Trichocomaceae sp. | CCGGGGACCACTGAACTTC |
AbsCor (A66) | Absidia corymbifera | AGGTCTTCTCTTAAGGTTCCTCAC |
PichFerm2 (A67) | Pichia fermentas | TTCTTGCGCAAGCAGAGTTG |
KlyMa1 (A83) | Kluyveromyces marxianus | GCTTAATTGCGCGGCCAG |
KlyMa2 (A84) | Kluyveromyces marxianus | TCATCCTCTGCTATCAGTTTTCTA |
CanRu (A85) | Environmental clone similar to C. rugosa | ACAATAATTCAACATTGTGTCAGAG |
Pichferm (A86) | Pichia fermentans and P. kluyveri | TGAACGCACATTGCGCCC |
Probe name | Common probe | Zip code |
PenCtr (A26) | GCGCCCGCCGACGG | GTACTAGCATATCATCGACG |
Pezizomycota (A29) | GGCTTTGTCACCCGCTCTGTAG | GTTCATCACGAGTGCGTAGA |
NP101 (A45) | AGCGCGCCTCCGTGTAG | CGTACAGTAAGTATGATGCC |
PenCom (A50) | GGGGACGGGCCCGAAAGG | TTAATTGACTTCGCTCCAGC |
IssOr (A52) | GTCGGAGCTGCGACTCGC | AAATCAGCAAACGGGCTCCG |
CanEt1 (A53) | CACTATGAGCTCGACCTCAGAT | GAATTGATAATCGCAGCCAC |
GalGe (A54) | AGTAGGATTACCCGCTGAACTTAA | GATATAGGAATGGCGCATAC |
TherLa (A55) | TGCGAGGATTGTCTGAGTGAC | CTCATCGGAAGGGCTCGTAA |
CanEt2 (A56) | ACGCTTGGGGTCTCCGAG | ACAGATGGAAAGGCAGTTCT |
GeoEme (A57) | CTTGAACAAAGGTTGCGGTCT | TTTGGTAGCTGAGTGCCCTA |
AspFum (A58) | TTCTGAAAGTATGCAGTCTGAGTTA | TAACTGGTTTGACGCCACGC |
Emesp A(65) | ATGCCTGAGAGTGATGCAGTC | CTTCTGTCAATATGGGTACG |
AbsCor (A66) | AGTTATGTGCAATGTTGGGTCAC | TATTTCGAGATATGAGGCGC |
PichFerm2 (A67) | AGAACAGGCTATGCCTTTTTCG | TTGATCGTAGATTCGTGAGC |
KlyMa1 (A83) | TTCTTGATTCTCTGCTATCAGTTTT | CACTAATTCAGACGAAGCCG |
KlyMa2 (A84) | TTTCTCATCCTAAACACAATGGAG | GACCCTATCAGACAGATGCA |
CanRu (A85) | CAATAACATCTAAAACCGATCATC | CACGCATCAAGACAGTATCG |
Pichferm (A86) | CATGGTATTCCATGGGGCAT | CAGCTCCTAAGACTTGGACA |
B3 control | TCTCGGGCTCAGTGCATTGA |