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. 2008 Dec 30;8:237. doi: 10.1186/1471-2180-8-237

Table 1.

Probe sequences, target organisms and complementary zip-code sequences

Probe name Target organism Discriminating probe
PenCtr (A26) Penicillium citrinum GCCTCGGCGGGCCCC
Pezizomycota (A29) various Penicillia and other GTCCGGTCCTCGAGCGTATGG
NP101 (A45) Environmental clone from compost ATCAAAGTGCTGCAGGGCT
PenCom (A50) Penicillium commune CCCCGTCCTCCGATCTCCG
IssOr (A52) Issatschenkia orientalis GCGGACGACGTGTAAAGAGC
CanEt1 (A53) Candida ethanolica ACGCTTGGGGTCTCCGAG
GalGe (A54) Galactomyces geotrichum ACAACACTATTCAACCTCAGATCA
TherLa (A55) Thermomyces lanuginosus CACTGTGAACGCTTTTGTGAA
CanEt2 (A56) Candida ethanolica CACGAGCGAACTAGAACAGG
GeoEme (A57) Geosmithia emersonii AGACCCTCGTGAACGCTGT
AspFum (A58) Aspergillus fumigatus AGACCCCAACATGAACGCTG
Emesp A(65) Emericella sp, Trichocomaceae sp. CCGGGGACCACTGAACTTC
AbsCor (A66) Absidia corymbifera AGGTCTTCTCTTAAGGTTCCTCAC
PichFerm2 (A67) Pichia fermentas TTCTTGCGCAAGCAGAGTTG
KlyMa1 (A83) Kluyveromyces marxianus GCTTAATTGCGCGGCCAG
KlyMa2 (A84) Kluyveromyces marxianus TCATCCTCTGCTATCAGTTTTCTA
CanRu (A85) Environmental clone similar to C. rugosa ACAATAATTCAACATTGTGTCAGAG
Pichferm (A86) Pichia fermentans and P. kluyveri TGAACGCACATTGCGCCC

Probe name Common probe Zip code

PenCtr (A26) GCGCCCGCCGACGG GTACTAGCATATCATCGACG
Pezizomycota (A29) GGCTTTGTCACCCGCTCTGTAG GTTCATCACGAGTGCGTAGA
NP101 (A45) AGCGCGCCTCCGTGTAG CGTACAGTAAGTATGATGCC
PenCom (A50) GGGGACGGGCCCGAAAGG TTAATTGACTTCGCTCCAGC
IssOr (A52) GTCGGAGCTGCGACTCGC AAATCAGCAAACGGGCTCCG
CanEt1 (A53) CACTATGAGCTCGACCTCAGAT GAATTGATAATCGCAGCCAC
GalGe (A54) AGTAGGATTACCCGCTGAACTTAA GATATAGGAATGGCGCATAC
TherLa (A55) TGCGAGGATTGTCTGAGTGAC CTCATCGGAAGGGCTCGTAA
CanEt2 (A56) ACGCTTGGGGTCTCCGAG ACAGATGGAAAGGCAGTTCT
GeoEme (A57) CTTGAACAAAGGTTGCGGTCT TTTGGTAGCTGAGTGCCCTA
AspFum (A58) TTCTGAAAGTATGCAGTCTGAGTTA TAACTGGTTTGACGCCACGC
Emesp A(65) ATGCCTGAGAGTGATGCAGTC CTTCTGTCAATATGGGTACG
AbsCor (A66) AGTTATGTGCAATGTTGGGTCAC TATTTCGAGATATGAGGCGC
PichFerm2 (A67) AGAACAGGCTATGCCTTTTTCG TTGATCGTAGATTCGTGAGC
KlyMa1 (A83) TTCTTGATTCTCTGCTATCAGTTTT CACTAATTCAGACGAAGCCG
KlyMa2 (A84) TTTCTCATCCTAAACACAATGGAG GACCCTATCAGACAGATGCA
CanRu (A85) CAATAACATCTAAAACCGATCATC CACGCATCAAGACAGTATCG
Pichferm (A86) CATGGTATTCCATGGGGCAT CAGCTCCTAAGACTTGGACA
B3 control TCTCGGGCTCAGTGCATTGA