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. 2008 Dec 30;8:237. doi: 10.1186/1471-2180-8-237

Table 4.

Amount of phylotypes in clone libraries from different samples and annotation result from Genbank.

Phylotype Phylogroup Closest Genbank match Reactor
NK06
day 8
Reactor
NK07
day 16
Reactor
NK09
day 3
Reactor
NK10
day 8
IVAR1
NK12
1 mo.
IVAR1
NK14a
1 mo.
IVAR1
NK14b
1 mo.
YTV1
NK19
day 21
FM177664 Basidiomycetes Mrakia sp. 1
FM177671 Basidiomycetes Coprinopsis cinerea 1
FM177679 Candida Candida rugosa 9
FM177672 Candida Candida rugosa 1
FM177678 Dipodascaceae Dipodascus australiensis 1
FM177644 Group1 Uncultured soil fungus 1
FM177645 Group1 Uncultured eukaryote 1
FM177646 Group1 Uncultured eukaryote 1
FM177647 Group1 Uncultured eukaryote 1
FM177648 Group1 Uncultured eukaryote 2
FM177650 Group1 Uncultured eukaryote 1
FM177649 Group1 Uncultured eukaryote 1
FM177653 Group1 Uncultured eukaryote 1 2 4
FM177665 Group1 Uncultured eukaryote 2 8
FM177668 Group1 Uncultured eukaryote 23 6
FM177670 Group1 Uncultured eukaryote 6 1
FM177666 Group1 Uncultured eukaryote 9 11 4
FM177667 Group1 Uncultured eukaryote 6
FM177669 Group1 Uncultured eukaryote 19 49
FM177651 Pezizomycotina Cephalotheca foveolata 1
FM177696 Pezizomycotina Penicillium radicum 1
FM177677 Pezizomycotina Thermomyces lanuginosus 25 61 51 71
FM177676 Pezizomycotina Trichocomaceae sp. 1 14 18
FM177684 Pezizomycotina Thermomyces lanuginosus 3 3
FM177685 Pezizomycotina Uncultured soil fungus 1
FM177688 Pezizomycotina Aspergillus oryzae 1 1 3
FM177689 Pezizomycotina Thermomyces lanuginosus 1
FM177691 Pezizomycotina Thermomyces lanuginosus 1
FM177695 Pezizomycotina Thermomyces lanuginosus 2
FM177662 Saccharomycetales 1 Issatchenkia orientalis 1 2 1 3 8 1 12
FM177654 Saccharomycetales 1 Saccharomycetales sp. 1
FM177663 Saccharomycetales 1 Saccharomycetales sp. 1
FM177655 Saccharomycetales 1 Saccharomycetaceae sp. 2
FM177656 Saccharomycetales 1 Saccharomycetales sp. 1
FM177661 Saccharomycetales 1 Issatchenkia orientalis 69
FM177673 Saccharomycetales 1 Uncultured eukaryote 1
FM177680 Saccharomycetales 1 Saccharomycetales sp. 7 1
FM177652 Saccharomycetales 2 Candida sake 1
FM177658 Saccharomycetales 2 Kluyveromyces marxianus 1 1
FM177659 Saccharomycetales 2 S. cerevisiae 2
FM177660 Saccharomycetales 2 S. cerevisiae 4
FM177675 Saccharomycetales 2 Torulaspora delbrueckii 1
FM177681 Saccharomycetales 2 Saccharomycetales sp. 2
FM177690 Saccharomycetales 2 Saccharomycetales sp. 1
FM177657 Zygomycetes Mucor sp 1
FM177674 Zygomycetes Absidia corymbifera 8 11 1
FM177682 Zygomycetes Mucor racemosus 1
FM177683 Zygomycetes Absidia corymbifera 1
FM177687 Zygomycetes Absidia corymbifera 2
FM177686 Zygomycetes Absidia corymbifera 2 1
FM177692 Zygomycetes Absidia sp. 1
FM177694 Zygomycetes Absidia corymbifera 1
FM177693 Zygomycetes Rhizomucor miehei 2 1

The phylotypes are marked with the EMBL nucleotide sequence accession number.

1 IVAR and YTV were from full-scale facilities