Table 1. The number of SFPs detected by the present and other methods from the yeast genomic DNA and RNA microarray datasets.

SFPs called	Method 1	Method 2	Method 3	Method 4	Method 5	Method 6
	(Present)	(Winzeler et al 1998)	(Ronald et al 2005)	(Cui et al 2005)	(West et al 2006)	(Rostoks et al 2005)
Shareda	2077	107	2475	429	1260	1401
Unique in DNAb	2030	3385	1550	574	2062	2697
Unique in RNAc	311	143	732	809	424	921
% sharedd	87	42.8	77.1	34.7	74.8	60.3

^athe SFPs called in both DNA and RNA microarray datasets.

^bthe SFPs called only in DNA microarray data.

^cthe SFPs called only in RNA microarray data.

^dpercentage of SFPs called in RNA data that were also called in the DNA.