Table 2. List of primers used and the PCR product size.
| Exon |
Primer |
Sequences (5'-3') |
Amplicon |
| 1 |
1F |
AGGGAACCGTGGCTCGGC |
207 |
| 1R |
GGGTGAGGGAAGTGGCTGC |
||
| 2 |
2.1F |
TTATCTCTCACTCTCCAGCC |
178 |
| 2.1R |
CTGTTGTTGCTTGAAGACCAC |
||
| 2.2F |
AAACTCTCACCAGCAACTCC |
197 |
|
| 2.2R |
GGAGACCTGTCTGAATATTGC |
||
| 3 |
3F |
GGACGTATGCTGTTGAACCAC |
166 |
| 3R |
TGAGCCCAAAGCAGCCACCA |
||
| 4 |
4F |
TGCAGCTGCCCGAGGATTAA |
133 |
| 4R |
CCGAAGTCCCAGAAAGACCA |
||
| 5 |
5.1F |
CTCTTCTTCCTCTTCACTCTG |
163 |
| 5.1R |
CGCTGTGAGCTAGCTCTAC |
||
| 5.2F |
CGGTGGTGTCTTTGTCAACG |
170 |
|
| 5.2R |
AGAGGGCGTTGAGAGTGG |
||
| 5a |
5aF |
CTCTACAGTAAGTTCTCATACC |
173 |
| 5aR |
GGAAGTGGACAGAAAACCAC |
||
| 6 |
6.1F |
TGGTTTTCTGTCCACTTCCC |
167 |
| 6.1R |
GCACTCCCGCTTATACTGG |
||
| 6.2F |
CCGAGAGTAGCGACTCCAG |
184 |
|
| 6.2R |
AGGAGAGAGCATTGGGCTTA |
||
| 7 |
7.1F |
GTGAGCTGAGATGGGTGA |
175 |
| 7.1R |
CTTCCGGTCTGCCCGTTC |
||
| 7.2F |
ATGGGCGCAGACGGCATG |
171 |
|
| 7.2R |
GACAGGCAAAGGGATGCAC |
||
| 8 |
8.1F |
CCCTTTTGGAGGCTCCAAG |
185 |
| 8.1R |
GATGTTCTATTTCTTTGCAGC |
||
| 8.2F |
TCCAACGGAGAAGATTCAG |
176 |
|
| 8.2R |
TCTTTGTACTGAAGATGTGGC |
||
| 9 |
9F |
GGAGGTGGGAACCAGTTTGA |
195 |
| 9R |
GTGAAACTGCACAGTCTCTC |
||
| 10 |
10.1F |
CTCGACGTAGACACAGTGC |
175 |
| 10.1R |
AATTGGTTGGTAGACACTGG |
||
| 10.2F |
TCAGAGAAGACAGGCCAGC |
153 |
|
| 10.2R |
CCCGGAGCAAACAGGTTTAA |
||
| 11 |
11F |
GGGCTCTGACTCTCACTCTG |
191 |
| 11R |
TTATGCAGGCCACCACCAGC |
||
| 12 |
12.1F |
GCTGTGTGATGTGTTCCTCA |
168 |
| 12.1R |
GACTGTTCATGTGTGTCTGC |
||
| 12.2F |
CTGCATGCTGCCCACCAG |
163 |
|
| 12.2R |
AAGAGAGATCGCCTCTGTGC |
||
| 13 |
13F |
CATGTCTGTTTCTCAAAGGG |
202 |
| 13R | CCATAGTCACTGACTGAATTAACAC |
For each pair of primers, the amplicon size is indicated in base pairs. F: forward primer; R: reverse primer. Exons 2, 5, 6, 7, 8, 10, and 12 were amplified in two overlapping fragments. In each case, primer pair (.1F and .1R) amplifies the most upstream 5' part of the target genomic DNA, and primer pair (.2F and .2R) amplifies the most downstream 3' part of the target genomic DNA encompassing the specific exonic sequences. Sequences are given in the 5'-3' direction.