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. 2009 Mar;149(3):1211–1230. doi: 10.1104/pp.108.131573

Table II.

Putative tobacco genes involved in specifying pistil identity or normal pistil morphology and function

These tobacco sequences were identified by the TBLASTN algorithm at the TOBEST database using the Arabidopsis sequences as query.

Arabidopsis Genes Involved in Pistil Development Accession No.a TOBEST Identifier BLAST e-Value/% Identity/% Similarity Previously Identified in Nicotiana
AG NP_567569 C025G07 2e-50/69/81 Yes
FUL NP_568929 C067C08b 1e-59/70/87 Yes
SPT AAG33640 S061H09c 7e-14/52/86
CRC AAD30526 C029A08 3e-52/62/70 Yes
ETT AAC23589 C075G08d 2e-15/53/67
PID AAF40202 S107E07 2e-43/64/72
TSL Q39238 S028G11e 4e-11/32/46
CLV1 AAB58929 S013B04f 3e-29/42/60
CLV2 AF177674 S092C11g 5e-22/41/59
ER NP_180201 C025H08 9e-69/84/92
LUG AF277458 C024G04 5e-46/59/74
SUP Q38895 S121D07 5e-25/80/85
PAN AAD19660 S001F08h 7e-05/32/60 Yes
FDH AJ010713 C125A09 4e-70/82/95
WUS AJ012310 C087E09i 3e-13/47/73
a

Accession numbers of the Arabidopsis sequences used to search the TOBEST database.

b

Encodes a MADS box protein, but the best hit by TBLASTX at TAIR is to APETALA1 (At1g69120).

c

Has similarity to transcription factors of the bHLH family, but the best hit by TBLASTX at TAIR is to At4g02590, which encodes UNE12 (for UNFERTILIZED EMBRYO SAC12).

d

ETT is an auxin response factor (ARF3). The TOBC075G08 encodes an ARF, but the best hit by TBLASTX at TAIR is to ARF8 (At5g37020).

e

Encodes a protein kinase, but the best hit by TBLASTX at TAIR is to ATPDK1 (At5g04510).

f

Encodes a Leu-rich repeat protein kinase, but the best hit by TBLASTX at TAIR is to At1g67720 and not to At1g08590 (CLV1 receptor kinase).

g

Encodes a Leu-rich repeat transmembrane protein kinase, but the best hit by TBLASTX at TAIR is to At5g01890 and not to At1g65380 (CLV2).

h

Encodes a bZIP transcription factor, but the best hit by TBLASTX at TAIR is to ATBZIP42 (At3g30530).

i

Encodes a WUS-related homeobox protein. The best hit by TBLASTX at TAIR is to At2g33880 (WOX9) and not to At2g17950 (WUS).