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Accuracy of the FDR estimated by the BNP model. The solid lines are the actual FPRs for different PScore cutoff values, and the dashed lines are the estimated FDR calculated by BNP model under the same criterion. The FDR (Err) estimated by the BNP model is larger than the actual FPR for lower PScore values, and for the filtered results with high quality (larger PScore), Err is close to the actual FPR.
