Table 1.
Number of unique probe sets on chip | 10179 | (% of total) |
Number of probe sets expressed in at least one region | 5982 | 58.8 |
Number of differentially expressed probe sets | 2838 | 27.9 |
Number of differentially expressed probe sets (> 2-fold) | 1027 | 10.1 |
Number of differentially expressed probe sets (> 8-fold) | 110 | 1.1 |
Number of differentially expressed probe sets (> 32-fold) | 17 | 0.2 |
Mean difference between highest and lowest region | 2.1 fold | |
Median difference between highest and lowest region | 1.8 fold | |
Largest significant difference between highest and lowest region | 337 fold | |
Smallest significant difference between highest and lowest region | 1.1 fold |
Transcripts called ‘present’ in > 65% of animals in any region were considered expressed. Differential expression was determined by one-way ANOVA with Benjamini-Hochberg correction (FDR < 1%).