Table 4.

Frequency of 57 shared spoligotypes (SITs) according to Brudey et al. [21], identified in 188 M. tuberculosis strains isolated with S315T mutation, from South America.

Lineage	SIT	Number of isolates	Number of DRE-PCR patterns	Number of isolates in cluster (%)
Beijing	1	3	2	2 (66.7)
Haarlem1	47	6	6	0
Haarlem3	50	19	16	6 (31.5)
Haarlem3	49	3	2	2 (66.7)
LAM1	20	9	4	7 (77.8)
LAM2	17	6	3	3 (50.0)
LAM3	33	8	4	4 (50.0)
LAM3/S convergent	4	3	2	2 (66.7)
LAM3	211	2	1	2 (100)
LAM4	828	3	3	0
LAM5	93	10	6	4 (40.0)
LAM6	64	9	6	2 (22.2)
LAM9	435	3	1	3 (100)
LAM9	177	3	3	0
LAM9	388	2	1	2 (100)
LAM9	42	22	12	14 (63.6)
S	1938	7	5	4 (57.0)
T1	53	17	11	4 (23.5)
U	397	3	2	2 (66.7)
U	402	2	2	0
U	1241	3	3	0
X1	119	3	3	0
X2	137	2	2	0
X3	92	3	2	2 (66.7)
X3	91	3	3	0
LAM4	60	2	2	0
U	602	2	2	0
T5-MAD2	58	1	Not done	Unique
LAM6	95	1	Not done	Unique
U (LAM3?)	106	1	Not done	Unique
T5	68	1	Not done	Unique
T3	157	1	Not done	Unique
T1	159	1	Not done	Unique
Haarlem3	207	1	Not done	Unique
T1	253	1	Not done	Unique
Beijing-Like	269	1	Not done	Unique
T1	353	1	Not done	Unique
T1	453	1	Not done	Unique
Haarlem3	631	1	Not done	Unique
S	707	1	Not done	Unique
S	827	1	Not done	Unique
LAM5-LAM6	867	1	Not done	Unique
X2	1341	1	Not done	Unique
T2	1355	1	Not done	Unique
LAM9	1535	1	Not done	Unique
LAM2	1691	1	Not done	Unique
LAM1	389	1	Not done	Unique
T1	276	1	Not done	Unique
Haarlem3	294	1	Not done	Unique
MANU2	1094	1	Not done	Unique
LAM5	176	1	Not done	Unique
T3	1655	1	Not done	Unique
LAM3	130	1	Not done	Unique
T4-CE1 ancestor?	65	1	Not done	Unique
Haarlem3-LAM9	335	1	Not done	Unique
T1	222	1	Not done	Unique
LAM3	1354	1	Not done	Unique